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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
35 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182473169
OIPS01000227
117741
Bacteroidota
TAG
Leu
>WENV182473140
OIPS01000051
175838
Bacteroidota
GTT
Asn
>WENV182473400
OIPS01015560
404226
Bacteroidota
CCT
Arg
>WENV182473336
OIPS01007443
175904
Bacteroidota
CGG
Pro
>WENV182473111
OIPS01000002
400161
Bacteroidota
GGT
Thr
>WENV182473335
OIPS01007150
289031
Bacteroidota
CAT
Met
>WENV182473119
OIPS01000015
156422
Bacteroidota
TAC
Val
>WENV182473153
OIPS01000090
280557
Bacteroidota
CAT
Met
>WENV182473164
OIPS01000208
20206
Bacteroidota
GGA
Ser
>WENV182473272
OIPS01002284
282712
Bacteroidota
TTT
Lys
>WENV182473135
OIPS01000044
118221
Bacteroidota
CAA
Leu
>WENV182473147
OIPS01000068
56493
Bacteroidota
TGA
Ser
>WENV182473128
OIPS01000030
175903
Bacteroidota
GTG
His
>WENV182473123
OIPS01000024
56385
Bacteroidota
TGA
Ser
>WENV182473303
OIPS01003975
182267
Bacteroidota
GTT
Asn
>WENV182473312
OIPS01005150
20449
Bacteroidota
GGA
Ser
>WENV182473440
OIPS01025891
21127
Bacteroidota
GGA
Ser
>WENV182473168
OIPS01000214
56072
Bacteroidota
TAA
Leu
>WENV182473289
OIPS01003086
57807
Bacteroidota
TGA
Ser
>WENV182473157
OIPS01000127
175902
Bacteroidota
GGC
Ala
>WENV182473158
OIPS01000145
280451
Bacteroidota
CGT
Thr
>WENV182473208
OIPS01000536
99847
Bacteroidota
GTA
Tyr
>WENV182473340
OIPS01007705
399200
Bacteroidota
CAT
Met
>WENV182473143
OIPS01000055
404109
Bacteroidota
CTC
Glu
>WENV182473321
OIPS01006366
186874
Bacteroidota
CAT
Met
>WENV182473132
OIPS01000038
46648
Bacteroidota
TAA
Leu
>WENV182473378
OIPS01011497
280478
Bacteroidota
GCC
Gly
>WENV182473207
OIPS01000533
187814
Bacteroidota
GTC
Asp
>WENV182473180
OIPS01000288
187814
Bacteroidota
GTC
Asp
>WENV182473127
OIPS01000028
398828
Bacteroidota
CCG
Arg
>WENV182473379
OIPS01011497
74084
Bacteroidota
CAG
Leu
>WENV182473131
OIPS01000038
481328
Bacteroidota
TTG
Gln
>WENV182473155
OIPS01000098
484496
Bacteroidota
TTG
Gln
>WENV182473332
OIPS01006956
285750
Bacteroidota
CCC
Gly
>WENV182473406
OIPS01017388
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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