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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182476328
OIQG01000700
398829
Bacteroidota
CCT
Arg
>WENV182476294
OIQG01000008
280557
Bacteroidota
CAT
Met
>WENV182476314
OIQG01000358
351598
Bacteroidota
CGG
Pro
>WENV182476350
OIQG01001963
398872
Bacteroidota
GGT
Thr
>WENV182476305
OIQG01000295
175936
Bacteroidota
CAT
Met
>WENV182476300
OIQG01000120
57807
Bacteroidota
TGA
Ser
>WENV182476322
OIQG01000566
398860
Bacteroidota
CTC
Glu
>WENV182476297
OIQG01000060
480404
Bacteroidota
TTG
Gln
>WENV182476303
OIQG01000148
99847
Bacteroidota
GTA
Tyr
>WENV182476371
OIQG01003025
332896
Bacteroidota
TTT
Lys
>WENV182476326
OIQG01000638
332896
Bacteroidota
TTT
Lys
>WENV182476317
OIQG01000445
20766
Bacteroidota
GGA
Ser
>WENV182476336
OIQG01000933
280532
Bacteroidota
>WENV182476313
OIQG01000357
229246
Bacteroidota
GGC
Ala
>WENV182476323
OIQG01000573
480318
Bacteroidota
CTG
Gln
>WENV182476299
OIQG01000117
158068
Bacteroidota
GGG
Pro
>WENV182476366
OIQG01002500
159415
Bacteroidota
TAC
Val
>WENV182476316
OIQG01000411
176192
Bacteroidota
TCT
Arg
>WENV182476358
OIQG01002200
484496
Bacteroidota
TTG
Gln
>WENV182476296
OIQG01000048
117804
Bacteroidota
TAG
Leu
>WENV182476361
OIQG01002259
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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