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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182478446
OIQO01000484
398829
Bacteroidota
CCT
Arg
>WENV182478420
OIQO01000043
280557
Bacteroidota
CAT
Met
>WENV182478503
OIQO01003883
398872
Bacteroidota
GGT
Thr
>WENV182478436
OIQO01000259
175936
Bacteroidota
CAT
Met
>WENV182478443
OIQO01000364
57807
Bacteroidota
TGA
Ser
>WENV182478442
OIQO01000300
398860
Bacteroidota
CTC
Glu
>WENV182478417
OIQO01000035
480404
Bacteroidota
TTG
Gln
>WENV182478431
OIQO01000228
175844
Bacteroidota
GGC
Ala
>WENV182478480
OIQO01002095
280532
Bacteroidota
>WENV182478426
OIQO01000159
480318
Bacteroidota
CTG
Gln
>WENV182478472
OIQO01001556
158068
Bacteroidota
GGG
Pro
>WENV182478462
OIQO01001098
159415
Bacteroidota
TAC
Val
>WENV182478468
OIQO01001441
176192
Bacteroidota
TCT
Arg
>WENV182478415
OIQO01000013
117804
Bacteroidota
TAG
Leu
>WENV182478486
OIQO01002729
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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