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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182478557
OIQP01000017
117741
Bacteroidota
TAG
Leu
>WENV182478551
OIQP01000005
398829
Bacteroidota
CCT
Arg
>WENV182478584
OIQP01000087
175838
Bacteroidota
GTT
Asn
>WENV182478576
OIQP01000068
400161
Bacteroidota
GGT
Thr
>WENV182478664
OIQP01000818
280557
Bacteroidota
CAT
Met
>WENV182478573
OIQP01000056
20206
Bacteroidota
GGA
Ser
>WENV182478820
OIQP01008897
483416
Bacteroidota
CTG
Gln
>WENV182478612
OIQP01000182
118221
Bacteroidota
CAA
Leu
>WENV182478570
OIQP01000051
56493
Bacteroidota
TGA
Ser
>WENV182478648
OIQP01000554
118089
Bacteroidota
TAG
Leu
>WENV182478791
OIQP01006788
175908
Bacteroidota
GTC
Asp
>WENV182478623
OIQP01000233
56385
Bacteroidota
TGA
Ser
>WENV182478577
OIQP01000068
312035
Bacteroidota
CCA
Trp
>WENV182478627
OIQP01000290
242241
Bacteroidota
GTC
Asp
>WENV182478564
OIQP01000030
57807
Bacteroidota
TGA
Ser
>WENV182478567
OIQP01000034
175902
Bacteroidota
GGC
Ala
>WENV182478879
OIQP01024737
398860
Bacteroidota
CTC
Glu
>WENV182478860
OIQP01017847
480404
Bacteroidota
TTG
Gln
>WENV182478653
OIQP01000637
280451
Bacteroidota
CGT
Thr
>WENV182478601
OIQP01000144
99847
Bacteroidota
GTA
Tyr
>WENV182478794
OIQP01006921
399200
Bacteroidota
CAT
Met
>WENV182478605
OIQP01000159
404109
Bacteroidota
CTC
Glu
>WENV182478689
OIQP01001781
186874
Bacteroidota
CAT
Met
>WENV182478603
OIQP01000158
46648
Bacteroidota
TAA
Leu
>WENV182478850
OIQP01015392
178179
Bacteroidota
GGC
Ala
>WENV182478561
OIQP01000026
332896
Bacteroidota
TTT
Lys
>WENV182478593
OIQP01000115
488746
Bacteroidota
CTG
Gln
>WENV182478691
OIQP01001851
280478
Bacteroidota
GCC
Gly
>WENV182478548
OIQP01000004
187400
Bacteroidota
GTT
Asn
>WENV182478555
OIQP01000015
158068
Bacteroidota
GGG
Pro
>WENV182478613
OIQP01000189
331443
Bacteroidota
CGT
Thr
>WENV182478626
OIQP01000284
398828
Bacteroidota
CCG
Arg
>WENV182478617
OIQP01000209
481328
Bacteroidota
TTG
Gln
>WENV182478556
OIQP01000015
280446
Bacteroidota
TTT
Lys
>WENV182478553
OIQP01000009
484496
Bacteroidota
TTG
Gln
>WENV182478703
OIQP01002178
285750
Bacteroidota
CCC
Gly
>WENV182478554
OIQP01000010
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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