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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182481152
OIRA01000209
99852
Bacillota
GTA
Tyr
>WENV182481216
OIRA01005794
405363
Bacillota
GCA
Cys
>WENV182481203
OIRA01004032
280428
Bacillota
GAA
Phe
>WENV182481206
OIRA01004532
190476
Bacillota
CAT
Met
>WENV182481154
OIRA01000252
280447
Bacillota
GAC
Val
>WENV182481175
OIRA01001025
5692
Bacillota
GCT
Ser
>WENV182481170
OIRA01000933
73009
Bacillota
CAG
Leu
>WENV182481218
OIRA01006000
291581
Bacillota
CGG
Pro
>WENV182481180
OIRA01001155
175859
Bacillota
TCT
Arg
>WENV182481190
OIRA01001674
175831
Bacillota
ACG
Arg
>WENV182481217
OIRA01006000
480322
Bacillota
CTG
Gln
>WENV182481148
OIRA01000084
175868
Bacillota
GTT
Asn
>WENV182481147
OIRA01000084
398854
Bacillota
CTC
Glu
>WENV182481156
OIRA01000345
497729
Bacillota
CCA
Trp
>WENV182481211
OIRA01004871
280444
Bacillota
GGT
Thr
>WENV182481197
OIRA01002654
179755
Bacillota
CCG
Arg
>WENV182481207
OIRA01004532
398832
Bacillota
TTC
Glu
>WENV182481227
OIRA01008211
118359
Bacillota
GTA
Tyr
>WENV182481189
OIRA01001637
398833
Bacillota
TGT
Thr
>WENV182481210
OIRA01004871
175849
Bacillota
GTC
Asp
>WENV182481195
OIRA01002429
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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