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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
36 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182482179
OIRD01020486
280500
Bacillota
TGC
Ala
>WENV182482004
OIRD01000867
405363
Bacillota
GCA
Cys
>WENV182481970
OIRD01000373
280428
Bacillota
GAA
Phe
>WENV182482084
OIRD01004939
179917
Bacillota
CAT
Met
>WENV182481964
OIRD01000349
175842
Bacillota
CAC
Val
>WENV182482202
OIRD01029878
179176
Bacillota
ACG
Arg
>WENV182481985
OIRD01000518
190476
Bacillota
CAT
Met
>WENV182482089
OIRD01005082
280447
Bacillota
GAC
Val
>WENV182482003
OIRD01000825
5692
Bacillota
GCT
Ser
>WENV182482181
OIRD01021163
186123
Bacillota
GTC
Asp
>WENV182481974
OIRD01000404
73009
Bacillota
CAG
Leu
>WENV182482119
OIRD01008647
481217
Bacillota
GCA
Cys
>WENV182481978
OIRD01000444
291581
Bacillota
CGG
Pro
>WENV182481930
OIRD01000105
175859
Bacillota
TCT
Arg
>WENV182481972
OIRD01000395
175831
Bacillota
ACG
Arg
>WENV182482182
OIRD01021163
291634
Bacillota
GAA
Phe
>WENV182481969
OIRD01000371
480322
Bacillota
CTG
Gln
>WENV182482068
OIRD01003401
175868
Bacillota
GTT
Asn
>WENV182481951
OIRD01000214
175868
Bacillota
GTT
Asn
>WENV182481995
OIRD01000753
322848
Bacillota
CTT
Lys
>WENV182481950
OIRD01000214
398854
Bacillota
CTC
Glu
>WENV182482056
OIRD01003087
291576
Bacillota
CCC
Gly
>WENV182482001
OIRD01000810
480324
Bacillota
TTG
Gln
>WENV182481983
OIRD01000496
280444
Bacillota
GGT
Thr
>WENV182482030
OIRD01002032
291597
Bacillota
TGC
Ala
>WENV182481971
OIRD01000373
321753
Bacillota
GCC
Gly
>WENV182481928
OIRD01000098
179755
Bacillota
CCG
Arg
>WENV182481986
OIRD01000518
398832
Bacillota
TTC
Glu
>WENV182482086
OIRD01004939
280476
Bacillota
TTT
Lys
>WENV182482209
OIRD01032720
285601
Bacillota
TTC
Glu
>WENV182481919
OIRD01000079
398833
Bacillota
TGT
Thr
>WENV182482176
OIRD01018217
285556
Bacillota
TGT
Thr
>WENV182481982
OIRD01000496
175849
Bacillota
GTC
Asp
>WENV182482032
OIRD01002032
280486
Bacillota
TGC
Ala
>WENV182482002
OIRD01000825
56074
Bacillota
TGA
Ser
>WENV182482063
OIRD01003200
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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