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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182482846
OIRG01003565
398829
Bacteroidota
CCT
Arg
>WENV182482780
OIRG01000039
280557
Bacteroidota
CAT
Met
>WENV182482782
OIRG01000044
351598
Bacteroidota
CGG
Pro
>WENV182482839
OIRG01003015
398872
Bacteroidota
GGT
Thr
>WENV182482793
OIRG01000215
175936
Bacteroidota
CAT
Met
>WENV182482799
OIRG01000439
398860
Bacteroidota
CTC
Glu
>WENV182482835
OIRG01002556
480404
Bacteroidota
TTG
Gln
>WENV182482838
OIRG01003015
99847
Bacteroidota
GTA
Tyr
>WENV182482808
OIRG01000759
27524
Bacteroidota
GGA
Ser
>WENV182482850
OIRG01003982
280532
Bacteroidota
>WENV182482807
OIRG01000725
229246
Bacteroidota
GGC
Ala
>WENV182482787
OIRG01000075
480318
Bacteroidota
CTG
Gln
>WENV182482866
OIRG01007455
159415
Bacteroidota
TAC
Val
>WENV182482826
OIRG01001544
176192
Bacteroidota
TCT
Arg
>WENV182482791
OIRG01000198
69204
Bacteroidota
TGA
Ser
>WENV182482778
OIRG01000021
117804
Bacteroidota
TAG
Leu
>WENV182482869
OIRG01007640
365112
Bacteroidota
TTT
Lys
>WENV182482792
OIRG01000208
398836
Bacteroidota
GCA
Cys
>WENV182482788
OIRG01000145
322836
Bacteroidota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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