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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
54 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182486879
OIRT01001394
99852
Bacillota
GTA
Tyr
>WENV182486750
OIRT01000008
349107
Bacillota
GCC
Gly
>WENV182486754
OIRT01000008
349107
Bacillota
GCC
Gly
>WENV182486766
OIRT01000024
349107
Bacillota
GCC
Gly
>WENV182486767
OIRT01000024
349107
Bacillota
GCC
Gly
>WENV182486768
OIRT01000024
405363
Bacillota
GCA
Cys
>WENV182486908
OIRT01003591
184537
Bacillota
ACG
Arg
>WENV182486910
OIRT01003666
290391
Bacillota
TAC
Val
>WENV182486765
OIRT01000024
280428
Bacillota
GAA
Phe
>WENV182486753
OIRT01000008
280428
Bacillota
GAA
Phe
>WENV182486936
OIRT01008246
408526
Bacillota
GCA
Cys
>WENV182486896
OIRT01002465
296855
Bacillota
GGT
Thr
>WENV182486878
OIRT01001295
48505
Bacillota
TGA
Ser
>WENV182486751
OIRT01000008
280466
Bacillota
TAC
Val
>WENV182486786
OIRT01000054
175842
Bacillota
CAC
Val
>WENV182486876
OIRT01001263
289717
Bacillota
CTT
Lys
>WENV182486759
OIRT01000017
190476
Bacillota
CAT
Met
>WENV182486861
OIRT01000609
20942
Bacillota
GGA
Ser
>WENV182486807
OIRT01000104
280447
Bacillota
GAC
Val
>WENV182486740
OIRT01000005
280447
Bacillota
GAC
Val
>WENV182486745
OIRT01000005
5692
Bacillota
GCT
Ser
>WENV182486820
OIRT01000140
73009
Bacillota
CAG
Leu
>WENV182486805
OIRT01000086
291581
Bacillota
CGG
Pro
>WENV182486831
OIRT01000182
175859
Bacillota
TCT
Arg
>WENV182486761
OIRT01000017
175831
Bacillota
ACG
Arg
>WENV182486897
OIRT01002465
184495
Bacillota
CAT
Met
>WENV182486893
OIRT01002465
289713
Bacillota
TGT
Thr
>WENV182486804
OIRT01000086
480322
Bacillota
CTG
Gln
>WENV182486729
OIRT01000001
480322
Bacillota
CTG
Gln
>WENV182486757
OIRT01000011
175868
Bacillota
GTT
Asn
>WENV182486888
OIRT01002378
289716
Bacillota
GTG
His
>WENV182486755
OIRT01000008
291576
Bacillota
CCC
Gly
>WENV182486749
OIRT01000006
480324
Bacillota
TTG
Gln
>WENV182486914
OIRT01003702
497729
Bacillota
CCA
Trp
>WENV182486909
OIRT01003666
180688
Bacillota
GTC
Asp
>WENV182486885
OIRT01002159
432453
Bacillota
TTC
Glu
>WENV182486852
OIRT01000539
480337
Bacillota
TCC
Gly
>WENV182486747
OIRT01000005
280444
Bacillota
GGT
Thr
>WENV182486743
OIRT01000005
280444
Bacillota
GGT
Thr
>WENV182486883
OIRT01002159
333281
Bacillota
GTT
Asn
>WENV182486762
OIRT01000017
179755
Bacillota
CCG
Arg
>WENV182486884
OIRT01002159
289761
Bacillota
TTT
Lys
>WENV182486849
OIRT01000485
46835
Bacillota
TAA
Leu
>WENV182486760
OIRT01000017
398832
Bacillota
TTC
Glu
>WENV182486913
OIRT01003666
175915
Bacillota
GTC
Asp
>WENV182486886
OIRT01002159
289715
Bacillota
TAC
Val
>WENV182486855
OIRT01000539
280476
Bacillota
TTT
Lys
>WENV182486929
OIRT01005637
20943
Bacillota
CGA
Ser
>WENV182486851
OIRT01000539
208539
Bacillota
TGG
Pro
>WENV182486911
OIRT01003666
285556
Bacillota
TGT
Thr
>WENV182486752
OIRT01000008
175849
Bacillota
GTC
Asp
>WENV182486742
OIRT01000005
175849
Bacillota
GTC
Asp
>WENV182486744
OIRT01000005
56074
Bacillota
TGA
Ser
>WENV182486803
OIRT01000086
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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