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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
55 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182495844
OITC01000407
99852
Bacillota
GTA
Tyr
>WENV182495733
OITC01000030
349107
Bacillota
GCC
Gly
>WENV182495737
OITC01000030
349107
Bacillota
GCC
Gly
>WENV182495850
OITC01000441
349107
Bacillota
GCC
Gly
>WENV182495852
OITC01000441
349107
Bacillota
GCC
Gly
>WENV182495853
OITC01000441
405363
Bacillota
GCA
Cys
>WENV182495922
OITC01004506
184537
Bacillota
ACG
Arg
>WENV182495736
OITC01000030
280428
Bacillota
GAA
Phe
>WENV182495849
OITC01000441
280428
Bacillota
GAA
Phe
>WENV182495868
OITC01000678
296855
Bacillota
GGT
Thr
>WENV182495937
OITC01006989
48505
Bacillota
TGA
Ser
>WENV182495734
OITC01000030
280466
Bacillota
TAC
Val
>WENV182495811
OITC01000212
175842
Bacillota
CAC
Val
>WENV182495923
OITC01004728
20932
Bacillota
GCT
Ser
>WENV182495854
OITC01000459
190476
Bacillota
CAT
Met
>WENV182495942
OITC01007729
482593
Bacillota
CCC
Gly
>WENV182495900
OITC01002527
20942
Bacillota
GGA
Ser
>WENV182495834
OITC01000310
280447
Bacillota
GAC
Val
>WENV182495808
OITC01000197
280447
Bacillota
GAC
Val
>WENV182495822
OITC01000250
5692
Bacillota
GCT
Ser
>WENV182495776
OITC01000101
73009
Bacillota
CAG
Leu
>WENV182495766
OITC01000059
291581
Bacillota
CGG
Pro
>WENV182495830
OITC01000306
175859
Bacillota
TCT
Arg
>WENV182495778
OITC01000105
175831
Bacillota
ACG
Arg
>WENV182495869
OITC01000678
184495
Bacillota
CAT
Met
>WENV182495884
OITC01001344
141202
Bacillota
CAA
Leu
>WENV182495865
OITC01000678
289713
Bacillota
TGT
Thr
>WENV182495883
OITC01001153
404091
Bacillota
TTG
Gln
>WENV182495787
OITC01000132
480322
Bacillota
CTG
Gln
>WENV182495765
OITC01000059
480322
Bacillota
CTG
Gln
>WENV182495862
OITC01000567
175868
Bacillota
GTT
Asn
>WENV182495771
OITC01000065
175868
Bacillota
GTT
Asn
>WENV182495882
OITC01001153
289716
Bacillota
GTG
His
>WENV182495770
OITC01000065
398854
Bacillota
CTC
Glu
>WENV182495726
OITC01000022
291576
Bacillota
CCC
Gly
>WENV182495941
OITC01007692
497729
Bacillota
CCA
Trp
>WENV182495898
OITC01002404
480337
Bacillota
TCC
Gly
>WENV182495788
OITC01000133
280444
Bacillota
GGT
Thr
>WENV182495762
OITC01000052
280444
Bacillota
GGT
Thr
>WENV182495886
OITC01001447
119459
Bacillota
TAG
Leu
>WENV182495914
OITC01004222
179755
Bacillota
CCG
Arg
>WENV182495892
OITC01002103
280547
Bacillota
GTC
Asp
>WENV182495934
OITC01006168
46835
Bacillota
TAA
Leu
>WENV182495855
OITC01000459
398832
Bacillota
TTC
Glu
>WENV182495933
OITC01006168
175915
Bacillota
GTC
Asp
>WENV182495903
OITC01002789
20943
Bacillota
CGA
Ser
>WENV182495897
OITC01002404
208539
Bacillota
TGG
Pro
>WENV182495899
OITC01002404
184539
Bacillota
TCT
Arg
>WENV182495907
OITC01003847
398833
Bacillota
TGT
Thr
>WENV182495851
OITC01000441
175849
Bacillota
GTC
Asp
>WENV182495761
OITC01000052
175849
Bacillota
GTC
Asp
>WENV182495735
OITC01000030
175849
Bacillota
GTC
Asp
>WENV182495943
OITC01007909
179166
Bacillota
TCT
Arg
>WENV182495821
OITC01000250
56074
Bacillota
TGA
Ser
>WENV182495833
OITC01000308
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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