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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
42 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182502219
OIUI01000010
172207
Bacteroidota
GGG
Pro
>WENV182502236
OIUI01000033
172207
Bacteroidota
GGG
Pro
>WENV182502248
OIUI01000047
117741
Bacteroidota
TAG
Leu
>WENV182502251
OIUI01000056
398829
Bacteroidota
CCT
Arg
>WENV182502375
OIUI01001039
404226
Bacteroidota
CCT
Arg
>WENV182502367
OIUI01000886
175904
Bacteroidota
CGG
Pro
>WENV182502242
OIUI01000041
280557
Bacteroidota
CAT
Met
>WENV182502218
OIUI01000010
20206
Bacteroidota
GGA
Ser
>WENV182502374
OIUI01001039
398871
Bacteroidota
TTC
Glu
>WENV182502265
OIUI01000109
175903
Bacteroidota
GTG
His
>WENV182502386
OIUI01001979
118089
Bacteroidota
TAG
Leu
>WENV182502368
OIUI01000886
280530
Bacteroidota
CCA
Trp
>WENV182502400
OIUI01004519
175936
Bacteroidota
CAT
Met
>WENV182502394
OIUI01002683
178907
Bacteroidota
TCT
Arg
>WENV182502211
OIUI01000004
29791
Bacteroidota
GCT
Ser
>WENV182502370
OIUI01000961
20449
Bacteroidota
GGA
Ser
>WENV182502241
OIUI01000037
56072
Bacteroidota
TAA
Leu
>WENV182502247
OIUI01000046
175902
Bacteroidota
GGC
Ala
>WENV182502212
OIUI01000004
398860
Bacteroidota
CTC
Glu
>WENV182502365
OIUI01000835
280451
Bacteroidota
CGT
Thr
>WENV182502293
OIUI01000162
99847
Bacteroidota
GTA
Tyr
>WENV182502390
OIUI01002365
399200
Bacteroidota
CAT
Met
>WENV182502217
OIUI01000010
488746
Bacteroidota
CTG
Gln
>WENV182502391
OIUI01002422
280478
Bacteroidota
GCC
Gly
>WENV182502415
OIUI01007132
280532
Bacteroidota
>WENV182502399
OIUI01004414
73011
Bacteroidota
CAA
Leu
>WENV182502363
OIUI01000767
480318
Bacteroidota
CTG
Gln
>WENV182502270
OIUI01000125
398828
Bacteroidota
CCG
Arg
>WENV182502412
OIUI01006213
74084
Bacteroidota
CAG
Leu
>WENV182502364
OIUI01000790
480325
Bacteroidota
CTG
Gln
>WENV182502289
OIUI01000155
140771
Bacteroidota
>WENV182502309
OIUI01000250
69204
Bacteroidota
TGA
Ser
>WENV182502271
OIUI01000127
69204
Bacteroidota
TGA
Ser
>WENV182502254
OIUI01000066
484496
Bacteroidota
TTG
Gln
>WENV182502209
OIUI01000002
484496
Bacteroidota
TTG
Gln
>WENV182502348
OIUI01000634
27502
Bacteroidota
GGA
Ser
>WENV182502417
OIUI01007545
285750
Bacteroidota
CCC
Gly
>WENV182502403
OIUI01005592
117804
Bacteroidota
TAG
Leu
>WENV182502260
OIUI01000079
365112
Bacteroidota
TTT
Lys
>WENV182502207
OIUI01000001
365112
Bacteroidota
TTT
Lys
>WENV182502302
OIUI01000193
365112
Bacteroidota
TTT
Lys
>WENV182502237
OIUI01000034
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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