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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
42 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182503845
OIUR01000053
117741
Bacteroidota
TAG
Leu
>WENV182503847
OIUR01000061
398829
Bacteroidota
CCT
Arg
>WENV182503985
OIUR01001545
404226
Bacteroidota
CCT
Arg
>WENV182504009
OIUR01003049
175904
Bacteroidota
CGG
Pro
>WENV182503965
OIUR01000657
280553
Bacteroidota
TTT
Lys
>WENV182503843
OIUR01000048
280557
Bacteroidota
CAT
Met
>WENV182503812
OIUR01000005
20206
Bacteroidota
GGA
Ser
>WENV182503957
OIUR01000558
398871
Bacteroidota
TTC
Glu
>WENV182504008
OIUR01003011
175906
Bacteroidota
GTG
His
>WENV182503861
OIUR01000114
175903
Bacteroidota
GTG
His
>WENV182504016
OIUR01003561
118089
Bacteroidota
TAG
Leu
>WENV182503955
OIUR01000516
175936
Bacteroidota
CAT
Met
>WENV182503962
OIUR01000568
203954
Bacteroidota
GTC
Asp
>WENV182503961
OIUR01000568
203954
Bacteroidota
GTC
Asp
>WENV182504014
OIUR01003370
178907
Bacteroidota
TCT
Arg
>WENV182503809
OIUR01000002
29791
Bacteroidota
GCT
Ser
>WENV182503969
OIUR01000855
20449
Bacteroidota
GGA
Ser
>WENV182503841
OIUR01000045
56072
Bacteroidota
TAA
Leu
>WENV182503919
OIUR01000261
57807
Bacteroidota
TGA
Ser
>WENV182503875
OIUR01000144
57807
Bacteroidota
TGA
Ser
>WENV182503824
OIUR01000030
175902
Bacteroidota
GGC
Ala
>WENV182503810
OIUR01000002
398860
Bacteroidota
CTC
Glu
>WENV182503980
OIUR01001143
480404
Bacteroidota
TTG
Gln
>WENV182503971
OIUR01000931
280451
Bacteroidota
CGT
Thr
>WENV182503899
OIUR01000185
99847
Bacteroidota
GTA
Tyr
>WENV182504020
OIUR01003638
399200
Bacteroidota
CAT
Met
>WENV182503811
OIUR01000005
488746
Bacteroidota
CTG
Gln
>WENV182503998
OIUR01002084
399026
Bacteroidota
CCT
Arg
>WENV182503984
OIUR01001444
280478
Bacteroidota
GCC
Gly
>WENV182503814
OIUR01000007
175844
Bacteroidota
GGC
Ala
>WENV182503953
OIUR01000454
73011
Bacteroidota
CAA
Leu
>WENV182503813
OIUR01000005
158068
Bacteroidota
GGG
Pro
>WENV182503808
OIUR01000001
158068
Bacteroidota
GGG
Pro
>WENV182503874
OIUR01000143
398828
Bacteroidota
CCG
Arg
>WENV182504001
OIUR01002127
74084
Bacteroidota
CAG
Leu
>WENV182503966
OIUR01000765
480325
Bacteroidota
CTG
Gln
>WENV182503830
OIUR01000034
280446
Bacteroidota
TTT
Lys
>WENV182503855
OIUR01000083
484496
Bacteroidota
TTG
Gln
>WENV182503842
OIUR01000046
484496
Bacteroidota
TTG
Gln
>WENV182504019
OIUR01003628
285750
Bacteroidota
CCC
Gly
>WENV182504011
OIUR01003141
117804
Bacteroidota
TAG
Leu
>WENV182503835
OIUR01000038
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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