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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182504134
OIUS01004332
398829
Bacteroidota
CCT
Arg
>WENV182504056
OIUS01000074
280557
Bacteroidota
CAT
Met
>WENV182504146
OIUS01006400
398872
Bacteroidota
GGT
Thr
>WENV182504061
OIUS01000157
175936
Bacteroidota
CAT
Met
>WENV182504063
OIUS01000187
57807
Bacteroidota
TGA
Ser
>WENV182504077
OIUS01000806
398860
Bacteroidota
CTC
Glu
>WENV182504054
OIUS01000060
480404
Bacteroidota
TTG
Gln
>WENV182504058
OIUS01000128
332896
Bacteroidota
TTT
Lys
>WENV182504051
OIUS01000013
332896
Bacteroidota
TTT
Lys
>WENV182504065
OIUS01000193
20766
Bacteroidota
GGA
Ser
>WENV182504078
OIUS01000867
280532
Bacteroidota
>WENV182504066
OIUS01000262
229246
Bacteroidota
GGC
Ala
>WENV182504113
OIUS01003271
480318
Bacteroidota
CTG
Gln
>WENV182504128
OIUS01003796
158068
Bacteroidota
GGG
Pro
>WENV182504110
OIUS01002954
159415
Bacteroidota
TAC
Val
>WENV182504069
OIUS01000343
176192
Bacteroidota
TCT
Arg
>WENV182504068
OIUS01000314
117804
Bacteroidota
TAG
Leu
>WENV182504074
OIUS01000627
398836
Bacteroidota
GCA
Cys
>WENV182504062
OIUS01000168
322836
Bacteroidota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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