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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182506725
OIVC01000445
184537
Bacillota
ACG
Arg
>WENV182506700
OIVC01000312
408526
Bacillota
GCA
Cys
>WENV182506648
OIVC01000070
296855
Bacillota
GGT
Thr
>WENV182506704
OIVC01000326
48505
Bacillota
TGA
Ser
>WENV182506732
OIVC01000588
289717
Bacillota
CTT
Lys
>WENV182506703
OIVC01000317
20932
Bacillota
GCT
Ser
>WENV182506668
OIVC01000124
291553
Bacillota
GAA
Phe
>WENV182506720
OIVC01000406
482593
Bacillota
CCC
Gly
>WENV182506672
OIVC01000164
20942
Bacillota
GGA
Ser
>WENV182506649
OIVC01000070
184495
Bacillota
CAT
Met
>WENV182506691
OIVC01000263
141202
Bacillota
CAA
Leu
>WENV182506809
OIVC01007990
137739
Bacillota
TAG
Leu
>WENV182506645
OIVC01000070
289713
Bacillota
TGT
Thr
>WENV182506674
OIVC01000176
404091
Bacillota
TTG
Gln
>WENV182506673
OIVC01000176
289716
Bacillota
GTG
His
>WENV182506746
OIVC01000874
497729
Bacillota
CCA
Trp
>WENV182506676
OIVC01000176
432453
Bacillota
TTC
Glu
>WENV182506804
OIVC01007773
480337
Bacillota
TCC
Gly
>WENV182506775
OIVC01002565
204381
Bacillota
GAT
Ile
>WENV182506753
OIVC01001316
119459
Bacillota
TAG
Leu
>WENV182506667
OIVC01000124
280547
Bacillota
GTC
Asp
>WENV182506699
OIVC01000312
445407
Bacillota
GCC
Gly
>WENV182506675
OIVC01000176
289761
Bacillota
TTT
Lys
>WENV182506677
OIVC01000176
289715
Bacillota
TAC
Val
>WENV182506687
OIVC01000252
20943
Bacillota
CGA
Ser
>WENV182506803
OIVC01007773
208539
Bacillota
TGG
Pro
>WENV182506805
OIVC01007773
184539
Bacillota
TCT
Arg
>WENV182506816
OIVC01009618
280486
Bacillota
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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