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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
24 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182507175
OIVK01000002
172207
Bacteroidota
GGG
Pro
>WENV182507196
OIVK01000021
117741
Bacteroidota
TAG
Leu
>WENV182507174
OIVK01000001
398829
Bacteroidota
CCT
Arg
>WENV182507187
OIVK01000010
175838
Bacteroidota
GTT
Asn
>WENV182507200
OIVK01000035
280557
Bacteroidota
CAT
Met
>WENV182507307
OIVK01005275
20492
Bacteroidota
GGA
Ser
>WENV182507177
OIVK01000002
20206
Bacteroidota
GGA
Ser
>WENV182507184
OIVK01000006
56493
Bacteroidota
TGA
Ser
>WENV182507185
OIVK01000006
175903
Bacteroidota
GTG
His
>WENV182507178
OIVK01000003
351598
Bacteroidota
CGG
Pro
>WENV182507226
OIVK01000280
398872
Bacteroidota
GGT
Thr
>WENV182507325
OIVK01009450
29791
Bacteroidota
GCT
Ser
>WENV182507316
OIVK01008397
21127
Bacteroidota
GGA
Ser
>WENV182507190
OIVK01000016
175902
Bacteroidota
GGC
Ala
>WENV182507326
OIVK01009450
398860
Bacteroidota
CTC
Glu
>WENV182507209
OIVK01000107
280451
Bacteroidota
CGT
Thr
>WENV182507192
OIVK01000018
99847
Bacteroidota
GTA
Tyr
>WENV182507176
OIVK01000002
488746
Bacteroidota
CTG
Gln
>WENV182507189
OIVK01000014
398828
Bacteroidota
CCG
Arg
>WENV182507207
OIVK01000083
176192
Bacteroidota
TCT
Arg
>WENV182507210
OIVK01000111
69204
Bacteroidota
TGA
Ser
>WENV182507199
OIVK01000028
484496
Bacteroidota
TTG
Gln
>WENV182507193
OIVK01000019
27502
Bacteroidota
GGA
Ser
>WENV182507208
OIVK01000097
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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