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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
104 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182511532
OIWL01000075
172207
Bacteroidota
GGG
Pro
>WENV182511584
OIWL01000140
172207
Bacteroidota
GGG
Pro
>WENV182511646
OIWL01000237
172207
Bacteroidota
GGG
Pro
>WENV182512110
OIWL01001763
172207
Bacteroidota
GGG
Pro
>WENV182511761
OIWL01000472
295385
Bacteroidota
CCA
Trp
>WENV182511413
OIWL01000001
285360
Bacteroidota
TTT
Lys
>WENV182512050
OIWL01001494
285360
Bacteroidota
TTT
Lys
>WENV182512417
OIWL01004634
285360
Bacteroidota
TTT
Lys
>WENV182511675
OIWL01000298
117741
Bacteroidota
TAG
Leu
>WENV182512178
OIWL01002123
175838
Bacteroidota
GTT
Asn
>WENV182512179
OIWL01002123
175838
Bacteroidota
GTT
Asn
>WENV182511879
OIWL01000784
175904
Bacteroidota
CGG
Pro
>WENV182512522
OIWL01007299
289031
Bacteroidota
CAT
Met
>WENV182511944
OIWL01001002
280557
Bacteroidota
CAT
Met
>WENV182511763
OIWL01000480
280557
Bacteroidota
CAT
Met
>WENV182511542
OIWL01000082
20206
Bacteroidota
GGA
Ser
>WENV182512721
OIWL01016107
483416
Bacteroidota
CTG
Gln
>WENV182511427
OIWL01000007
201819
Bacteroidota
CAT
Met
>WENV182512322
OIWL01003259
56493
Bacteroidota
TGA
Ser
>WENV182511602
OIWL01000161
175906
Bacteroidota
GTG
His
>WENV182511587
OIWL01000147
175903
Bacteroidota
GTG
His
>WENV182512518
OIWL01007211
351598
Bacteroidota
CGG
Pro
>WENV182512515
OIWL01007082
351598
Bacteroidota
CGG
Pro
>WENV182512311
OIWL01003088
351598
Bacteroidota
CGG
Pro
>WENV182512081
OIWL01001606
351598
Bacteroidota
CGG
Pro
>WENV182512020
OIWL01001338
351598
Bacteroidota
CGG
Pro
>WENV182511807
OIWL01000598
351598
Bacteroidota
CGG
Pro
>WENV182511623
OIWL01000198
351598
Bacteroidota
CGG
Pro
>WENV182511620
OIWL01000197
351598
Bacteroidota
CGG
Pro
>WENV182512660
OIWL01012131
291612
Bacteroidota
>WENV182511776
OIWL01000535
118089
Bacteroidota
TAG
Leu
>WENV182511720
OIWL01000370
280530
Bacteroidota
CCA
Trp
>WENV182512024
OIWL01001364
175936
Bacteroidota
CAT
Met
>WENV182511629
OIWL01000205
203954
Bacteroidota
GTC
Asp
>WENV182511939
OIWL01000986
178907
Bacteroidota
TCT
Arg
>WENV182511546
OIWL01000089
178907
Bacteroidota
TCT
Arg
>WENV182512757
OIWL01020139
405877
Bacteroidota
GGT
Thr
>WENV182512539
OIWL01007942
182267
Bacteroidota
GTT
Asn
>WENV182512538
OIWL01007942
182267
Bacteroidota
GTT
Asn
>WENV182511988
OIWL01001176
20449
Bacteroidota
GGA
Ser
>WENV182511628
OIWL01000203
20449
Bacteroidota
GGA
Ser
>WENV182511489
OIWL01000033
56072
Bacteroidota
TAA
Leu
>WENV182511639
OIWL01000231
175902
Bacteroidota
GGC
Ala
>WENV182511813
OIWL01000620
179697
Bacteroidota
TGT
Thr
>WENV182511962
OIWL01001084
480404
Bacteroidota
TTG
Gln
>WENV182511750
OIWL01000449
480404
Bacteroidota
TTG
Gln
>WENV182511543
OIWL01000084
280451
Bacteroidota
CGT
Thr
>WENV182511417
OIWL01000002
99847
Bacteroidota
GTA
Tyr
>WENV182511977
OIWL01001127
399200
Bacteroidota
CAT
Met
>WENV182511654
OIWL01000240
399200
Bacteroidota
CAT
Met
>WENV182511453
OIWL01000025
399200
Bacteroidota
CAT
Met
>WENV182512900
OIWL01042338
178179
Bacteroidota
GGC
Ala
>WENV182511541
OIWL01000082
488746
Bacteroidota
CTG
Gln
>WENV182511775
OIWL01000534
399026
Bacteroidota
CCT
Arg
>WENV182511571
OIWL01000117
27524
Bacteroidota
GGA
Ser
>WENV182512747
OIWL01018883
186108
Bacteroidota
GTT
Asn
>WENV182511609
OIWL01000176
280532
Bacteroidota
>WENV182511503
OIWL01000043
73011
Bacteroidota
CAA
Leu
>WENV182511766
OIWL01000501
280515
Bacteroidota
CCA
Trp
>WENV182512297
OIWL01002998
183889
Bacteroidota
GGC
Ala
>WENV182512120
OIWL01001825
480318
Bacteroidota
CTG
Gln
>WENV182511533
OIWL01000075
480318
Bacteroidota
CTG
Gln
>WENV182511519
OIWL01000059
398828
Bacteroidota
CCG
Arg
>WENV182511626
OIWL01000203
74084
Bacteroidota
CAG
Leu
>WENV182512043
OIWL01001457
159415
Bacteroidota
TAC
Val
>WENV182511608
OIWL01000174
159415
Bacteroidota
TAC
Val
>WENV182511574
OIWL01000121
480325
Bacteroidota
CTG
Gln
>WENV182512184
OIWL01002154
176192
Bacteroidota
TCT
Arg
>WENV182511603
OIWL01000162
176192
Bacteroidota
TCT
Arg
>WENV182511422
OIWL01000005
176192
Bacteroidota
TCT
Arg
>WENV182511957
OIWL01001067
69204
Bacteroidota
TGA
Ser
>WENV182511848
OIWL01000709
69204
Bacteroidota
TGA
Ser
>WENV182511742
OIWL01000441
69204
Bacteroidota
TGA
Ser
>WENV182511691
OIWL01000351
69204
Bacteroidota
TGA
Ser
>WENV182511578
OIWL01000132
69204
Bacteroidota
TGA
Ser
>WENV182512540
OIWL01007990
280446
Bacteroidota
TTT
Lys
>WENV182511647
OIWL01000237
280446
Bacteroidota
TTT
Lys
>WENV182511540
OIWL01000081
280446
Bacteroidota
TTT
Lys
>WENV182511419
OIWL01000002
280446
Bacteroidota
TTT
Lys
>WENV182512288
OIWL01002890
484496
Bacteroidota
TTG
Gln
>WENV182511632
OIWL01000210
484496
Bacteroidota
TTG
Gln
>WENV182511487
OIWL01000032
484496
Bacteroidota
TTG
Gln
>WENV182511421
OIWL01000003
484496
Bacteroidota
TTG
Gln
>WENV182511577
OIWL01000127
27502
Bacteroidota
GGA
Ser
>WENV182511485
OIWL01000030
27502
Bacteroidota
GGA
Ser
>WENV182511635
OIWL01000219
285750
Bacteroidota
CCC
Gly
>WENV182512331
OIWL01003366
188555
Bacteroidota
CAT
Met
>WENV182512670
OIWL01012770
117804
Bacteroidota
TAG
Leu
>WENV182511969
OIWL01001100
365112
Bacteroidota
TTT
Lys
>WENV182511884
OIWL01000801
365112
Bacteroidota
TTT
Lys
>WENV182511877
OIWL01000774
365112
Bacteroidota
TTT
Lys
>WENV182511777
OIWL01000536
365112
Bacteroidota
TTT
Lys
>WENV182511444
OIWL01000022
365112
Bacteroidota
TTT
Lys
>WENV182512313
OIWL01003101
398836
Bacteroidota
GCA
Cys
>WENV182512271
OIWL01002708
398836
Bacteroidota
GCA
Cys
>WENV182512208
OIWL01002309
398836
Bacteroidota
GCA
Cys
>WENV182511798
OIWL01000578
398836
Bacteroidota
GCA
Cys
>WENV182511767
OIWL01000503
398836
Bacteroidota
GCA
Cys
>WENV182511655
OIWL01000251
398836
Bacteroidota
GCA
Cys
>WENV182511558
OIWL01000100
398836
Bacteroidota
GCA
Cys
>WENV182511536
OIWL01000078
398836
Bacteroidota
GCA
Cys
>WENV182511423
OIWL01000006
398836
Bacteroidota
GCA
Cys
>WENV182511576
OIWL01000126
170323
Bacteroidota
GGG
Pro
>WENV182511614
OIWL01000193
322836
Bacteroidota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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