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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182557658
OJDK01001254
400818
Bacteroidota
TTC
Glu
>WENV182557573
OJDK01000377
73133
Bacteroidota
TAA
Leu
>WENV182557655
OJDK01001186
191838
Bacteroidota
CAT
Met
>WENV182557576
OJDK01000397
120026
Bacteroidota
GTA
Tyr
>WENV182557557
OJDK01000220
156605
Bacteroidota
GAC
Val
>WENV182557577
OJDK01000397
364431
Bacteroidota
TCC
Gly
>WENV182557596
OJDK01000552
281190
Bacteroidota
CAT
Met
>WENV182557656
OJDK01001211
209351
Bacteroidota
CAT
Met
>WENV182557664
OJDK01001529
155808
Bacteroidota
TGG
Pro
>WENV182557620
OJDK01000803
155808
Bacteroidota
TGG
Pro
>WENV182557621
OJDK01000803
176707
Bacteroidota
TCT
Arg
>WENV182557759
OJDK01007958
74253
Bacteroidota
GCT
Ser
>WENV182557481
OJDK01000039
225069
Bacteroidota
TCG
Arg
>WENV182557788
OJDK01014989
402343
Bacteroidota
CCA
Trp
>WENV182557651
OJDK01001155
379077
Bacteroidota
TTT
Lys
>WENV182557756
OJDK01007248
176817
Bacteroidota
CAT
Met
>WENV182557554
OJDK01000208
179956
Bacteroidota
GTT
Asn
>WENV182557760
OJDK01007958
156424
Bacteroidota
TGG
Pro
>WENV182557634
OJDK01000933
176708
Bacteroidota
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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