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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182563092
OJEB01000151
402532
Bacteroidota
GCC
Gly
>WENV182563155
OJEB01001095
120026
Bacteroidota
GTA
Tyr
>WENV182563229
OJEB01002781
156605
Bacteroidota
GAC
Val
>WENV182563156
OJEB01001095
281336
Bacteroidota
TCC
Gly
>WENV182563179
OJEB01001544
281190
Bacteroidota
CAT
Met
>WENV182563187
OJEB01001662
155786
Bacteroidota
TGG
Pro
>WENV182563125
OJEB01000602
366169
Bacteroidota
GAA
Phe
>WENV182563186
OJEB01001662
74253
Bacteroidota
GCT
Ser
>WENV182563102
OJEB01000196
197494
Bacteroidota
GTC
Asp
>WENV182563138
OJEB01000644
399285
Bacteroidota
TTC
Glu
>WENV182563158
OJEB01001095
372845
Bacteroidota
CCA
Trp
>WENV182563265
OJEB01004142
176699
Bacteroidota
GTT
Asn
>WENV182563365
OJEB01015032
361792
Bacteroidota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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