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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182590033
OJIH01000027
185999
Gammaproteobacteria
CCG
Arg
>WENV182590065
OJIH01000133
311084
Gammaproteobacteria
GCC
Gly
>WENV182590066
OJIH01000133
480629
Gammaproteobacteria
GCA
Cys
>WENV182590037
OJIH01000029
181365
Gammaproteobacteria
CAT
Met
>WENV182590284
OJIH01015721
287558
Gammaproteobacteria
TTC
Glu
>WENV182590108
OJIH01000331
335783
Gammaproteobacteria
GTT
Asn
>WENV182590020
OJIH01000011
176301
Gammaproteobacteria
GAT
Ile
>WENV182590015
OJIH01000001
340790
Gammaproteobacteria
TGT
Thr
>WENV182590151
OJIH01001187
201377
Gammaproteobacteria
TGG
Pro
>WENV182590025
OJIH01000014
281791
Gammaproteobacteria
GTG
His
>WENV182590283
OJIH01015721
349758
Gammaproteobacteria
GGC
Ala
>WENV182590200
OJIH01003951
282018
Gammaproteobacteria
TGT
Thr
>WENV182590022
OJIH01000012
286980
Gammaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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