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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
8 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182591257
OJIL01006023
446430
Alphaproteobacteria
CAC
Val
>WENV182591295
OJIL01012282
400387
Alphaproteobacteria
GGT
Thr
>WENV182591271
OJIL01007759
201940
Alphaproteobacteria
CAT
Met
>WENV182591240
OJIL01003941
281659
Alphaproteobacteria
TGC
Ala
>WENV182591207
OJIL01001550
340918
Alphaproteobacteria
CGT
Thr
>WENV182591253
OJIL01005480
178503
Alphaproteobacteria
GGG
Pro
>WENV182591272
OJIL01007797
178784
Alphaproteobacteria
CAT
Met
>WENV182591248
OJIL01005004
398996
Alphaproteobacteria
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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