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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
80 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182600662
OJJH01000410
295385
Bacteroidota
CCA
Trp
>WENV182600920
OJJH01011638
295385
Bacteroidota
CCA
Trp
>WENV182600615
OJJH01000170
285360
Bacteroidota
TTT
Lys
>WENV182600721
OJJH01001341
285360
Bacteroidota
TTT
Lys
>WENV182600788
OJJH01002942
285360
Bacteroidota
TTT
Lys
>WENV182600796
OJJH01003195
117741
Bacteroidota
TAG
Leu
>WENV182600558
OJJH01000051
398829
Bacteroidota
CCT
Arg
>WENV182600888
OJJH01008121
398829
Bacteroidota
CCT
Arg
>WENV182600892
OJJH01008473
404226
Bacteroidota
CCT
Arg
>WENV182600499
OJJH01000008
73057
Bacteroidota
GAG
Leu
>WENV182600684
OJJH01000694
280557
Bacteroidota
CAT
Met
>WENV182600584
OJJH01000075
280557
Bacteroidota
CAT
Met
>WENV182600931
OJJH01013517
20492
Bacteroidota
GGA
Ser
>WENV182600573
OJJH01000062
20492
Bacteroidota
GGA
Ser
>WENV182600924
OJJH01012582
20206
Bacteroidota
GGA
Ser
>WENV182600873
OJJH01006546
398871
Bacteroidota
TTC
Glu
>WENV182600872
OJJH01006546
398871
Bacteroidota
TTC
Glu
>WENV182600753
OJJH01002185
201819
Bacteroidota
CAT
Met
>WENV182600777
OJJH01002561
56493
Bacteroidota
TGA
Ser
>WENV182600604
OJJH01000140
56493
Bacteroidota
TGA
Ser
>WENV182600909
OJJH01009687
291612
Bacteroidota
>WENV182600908
OJJH01009588
291612
Bacteroidota
>WENV182600807
OJJH01003456
291612
Bacteroidota
>WENV182600577
OJJH01000067
398872
Bacteroidota
GGT
Thr
>WENV182600537
OJJH01000030
398872
Bacteroidota
GGT
Thr
>WENV182600495
OJJH01000006
175936
Bacteroidota
CAT
Met
>WENV182600876
OJJH01006693
203954
Bacteroidota
GTC
Asp
>WENV182600877
OJJH01006693
203954
Bacteroidota
GTC
Asp
>WENV182600651
OJJH01000356
29791
Bacteroidota
GCT
Ser
>WENV182600917
OJJH01011064
20449
Bacteroidota
GGA
Ser
>WENV182600808
OJJH01003601
20449
Bacteroidota
GGA
Ser
>WENV182600883
OJJH01007469
57807
Bacteroidota
TGA
Ser
>WENV182600846
OJJH01004697
57807
Bacteroidota
TGA
Ser
>WENV182600680
OJJH01000650
57807
Bacteroidota
TGA
Ser
>WENV182600667
OJJH01000545
57807
Bacteroidota
TGA
Ser
>WENV182600603
OJJH01000129
57807
Bacteroidota
TGA
Ser
>WENV182600505
OJJH01000010
57807
Bacteroidota
TGA
Ser
>WENV182600504
OJJH01000010
57807
Bacteroidota
TGA
Ser
>WENV182600799
OJJH01003221
175902
Bacteroidota
GGC
Ala
>WENV182600886
OJJH01007522
398860
Bacteroidota
CTC
Glu
>WENV182600652
OJJH01000356
398860
Bacteroidota
CTC
Glu
>WENV182600542
OJJH01000033
398860
Bacteroidota
CTC
Glu
>WENV182600785
OJJH01002810
480404
Bacteroidota
TTG
Gln
>WENV182600503
OJJH01000009
480404
Bacteroidota
TTG
Gln
>WENV182600790
OJJH01003080
280451
Bacteroidota
CGT
Thr
>WENV182600882
OJJH01007332
99847
Bacteroidota
GTA
Tyr
>WENV182600772
OJJH01002489
99847
Bacteroidota
GTA
Tyr
>WENV182600760
OJJH01002297
99847
Bacteroidota
GTA
Tyr
>WENV182600593
OJJH01000109
99847
Bacteroidota
GTA
Tyr
>WENV182600492
OJJH01000006
399026
Bacteroidota
CCT
Arg
>WENV182600481
OJJH01000002
20766
Bacteroidota
GGA
Ser
>WENV182600805
OJJH01003397
20766
Bacteroidota
GGA
Ser
>WENV182600730
OJJH01001617
186108
Bacteroidota
GTT
Asn
>WENV182600608
OJJH01000147
175844
Bacteroidota
GGC
Ala
>WENV182600491
OJJH01000005
175844
Bacteroidota
GGC
Ala
>WENV182600485
OJJH01000004
280532
Bacteroidota
>WENV182600718
OJJH01001189
183889
Bacteroidota
GGC
Ala
>WENV182600512
OJJH01000013
480318
Bacteroidota
CTG
Gln
>WENV182600864
OJJH01006067
158068
Bacteroidota
GGG
Pro
>WENV182600513
OJJH01000013
158068
Bacteroidota
GGG
Pro
>WENV182600702
OJJH01000967
186142
Bacteroidota
GAT
Ile
>WENV182600716
OJJH01001110
159415
Bacteroidota
TAC
Val
>WENV182600717
OJJH01001110
159415
Bacteroidota
TAC
Val
>WENV182600887
OJJH01007585
159415
Bacteroidota
TAC
Val
>WENV182600919
OJJH01011609
159415
Bacteroidota
TAC
Val
>WENV182600484
OJJH01000003
176192
Bacteroidota
TCT
Arg
>WENV182600712
OJJH01001076
280446
Bacteroidota
TTT
Lys
>WENV182600621
OJJH01000222
280446
Bacteroidota
TTT
Lys
>WENV182600817
OJJH01003887
295349
Bacteroidota
CCA
Trp
>WENV182600910
OJJH01009869
484496
Bacteroidota
TTG
Gln
>WENV182600668
OJJH01000546
484496
Bacteroidota
TTG
Gln
>WENV182600496
OJJH01000007
484496
Bacteroidota
TTG
Gln
>WENV182600901
OJJH01008933
285750
Bacteroidota
CCC
Gly
>WENV182600477
OJJH01000001
117804
Bacteroidota
TAG
Leu
>WENV182600703
OJJH01000967
186143
Bacteroidota
TGC
Ala
>WENV182600792
OJJH01003103
398836
Bacteroidota
GCA
Cys
>WENV182600771
OJJH01002477
398836
Bacteroidota
GCA
Cys
>WENV182600660
OJJH01000394
398836
Bacteroidota
GCA
Cys
>WENV182600506
OJJH01000010
398836
Bacteroidota
GCA
Cys
>WENV182600607
OJJH01000144
322836
Bacteroidota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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