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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
81 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182617552
OJKE01000032
99852
Bacillota
GTA
Tyr
>WENV182617878
OJKE01000707
99852
Bacillota
GTA
Tyr
>WENV182617921
OJKE01001212
280500
Bacillota
TGC
Ala
>WENV182618317
OJKE01030739
280500
Bacillota
TGC
Ala
>WENV182618337
OJKE01035901
280500
Bacillota
TGC
Ala
>WENV182617571
OJKE01000043
349107
Bacillota
GCC
Gly
>WENV182617575
OJKE01000043
349107
Bacillota
GCC
Gly
>WENV182617826
OJKE01000388
349107
Bacillota
GCC
Gly
>WENV182617828
OJKE01000388
349107
Bacillota
GCC
Gly
>WENV182617829
OJKE01000388
405363
Bacillota
GCA
Cys
>WENV182617760
OJKE01000223
290391
Bacillota
TAC
Val
>WENV182618051
OJKE01004423
290391
Bacillota
TAC
Val
>WENV182617825
OJKE01000388
280428
Bacillota
GAA
Phe
>WENV182617574
OJKE01000043
280428
Bacillota
GAA
Phe
>WENV182618160
OJKE01009580
229015
Bacillota
GTG
His
>WENV182617974
OJKE01002352
179917
Bacillota
CAT
Met
>WENV182617572
OJKE01000043
280466
Bacillota
TAC
Val
>WENV182617582
OJKE01000047
175842
Bacillota
CAC
Val
>WENV182618249
OJKE01021709
228119
Bacillota
TCT
Arg
>WENV182617969
OJKE01002310
228119
Bacillota
TCT
Arg
>WENV182617842
OJKE01000468
228119
Bacillota
TCT
Arg
>WENV182618218
OJKE01016340
179176
Bacillota
ACG
Arg
>WENV182617961
OJKE01002121
295166
Bacillota
TGC
Ala
>WENV182618220
OJKE01016913
190476
Bacillota
CAT
Met
>WENV182617593
OJKE01000057
190476
Bacillota
CAT
Met
>WENV182618181
OJKE01011615
399153
Bacillota
TTC
Glu
>WENV182618102
OJKE01006531
73664
Bacillota
CAG
Leu
>WENV182617816
OJKE01000361
280447
Bacillota
GAC
Val
>WENV182617583
OJKE01000047
280447
Bacillota
GAC
Val
>WENV182617623
OJKE01000072
5692
Bacillota
GCT
Ser
>WENV182617997
OJKE01002560
175825
Bacillota
GAT
Ile
>WENV182617971
OJKE01002352
284723
Bacillota
TAC
Val
>WENV182617948
OJKE01001786
284723
Bacillota
TAC
Val
>WENV182617694
OJKE01000126
73009
Bacillota
CAG
Leu
>WENV182617551
OJKE01000032
73009
Bacillota
CAG
Leu
>WENV182617730
OJKE01000165
291581
Bacillota
CGG
Pro
>WENV182618193
OJKE01012847
175859
Bacillota
TCT
Arg
>WENV182617692
OJKE01000126
175859
Bacillota
TCT
Arg
>WENV182617958
OJKE01002035
398835
Bacillota
GCC
Gly
>WENV182617864
OJKE01000616
398835
Bacillota
GCC
Gly
>WENV182617996
OJKE01002560
280436
Bacillota
TGC
Ala
>WENV182618217
OJKE01016190
21311
Bacillota
GCT
Ser
>WENV182617635
OJKE01000086
175831
Bacillota
ACG
Arg
>WENV182617909
OJKE01001043
179810
Bacillota
TCT
Arg
>WENV182618332
OJKE01035487
346451
Bacillota
TTT
Lys
>WENV182617729
OJKE01000165
480322
Bacillota
CTG
Gln
>WENV182617630
OJKE01000077
480322
Bacillota
CTG
Gln
>WENV182617846
OJKE01000490
175868
Bacillota
GTT
Asn
>WENV182617734
OJKE01000187
175868
Bacillota
GTT
Asn
>WENV182617732
OJKE01000187
322848
Bacillota
CTT
Lys
>WENV182617591
OJKE01000054
322848
Bacillota
CTT
Lys
>WENV182617733
OJKE01000187
398854
Bacillota
CTC
Glu
>WENV182617590
OJKE01000054
398854
Bacillota
CTC
Glu
>WENV182618025
OJKE01003350
291576
Bacillota
CCC
Gly
>WENV182617689
OJKE01000120
480324
Bacillota
TTG
Gln
>WENV182618342
OJKE01036097
497729
Bacillota
CCA
Trp
>WENV182618050
OJKE01004423
180688
Bacillota
GTC
Asp
>WENV182617803
OJKE01000298
280444
Bacillota
GGT
Thr
>WENV182617800
OJKE01000298
280444
Bacillota
GGT
Thr
>WENV182618000
OJKE01002669
291597
Bacillota
TGC
Ala
>WENV182617592
OJKE01000057
179755
Bacillota
CCG
Arg
>WENV182617890
OJKE01000850
46835
Bacillota
TAA
Leu
>WENV182618221
OJKE01016913
398832
Bacillota
TTC
Glu
>WENV182617594
OJKE01000057
398832
Bacillota
TTC
Glu
>WENV182618251
OJKE01021709
280476
Bacillota
TTT
Lys
>WENV182618210
OJKE01015158
280476
Bacillota
TTT
Lys
>WENV182617965
OJKE01002310
280476
Bacillota
TTT
Lys
>WENV182618037
OJKE01003870
289123
Bacillota
GGT
Thr
>WENV182618260
OJKE01022182
321248
Bacillota
TAC
Val
>WENV182618100
OJKE01006331
321248
Bacillota
TAC
Val
>WENV182617937
OJKE01001629
321248
Bacillota
TAC
Val
>WENV182618014
OJKE01003103
280483
Bacillota
GAA
Phe
>WENV182618046
OJKE01004344
298260
Bacillota
GTT
Asn
>WENV182617983
OJKE01002413
298260
Bacillota
GTT
Asn
>WENV182617877
OJKE01000707
398833
Bacillota
TGT
Thr
>WENV182618052
OJKE01004423
285556
Bacillota
TGT
Thr
>WENV182617827
OJKE01000388
175849
Bacillota
GTC
Asp
>WENV182617802
OJKE01000298
175849
Bacillota
GTC
Asp
>WENV182617573
OJKE01000043
175849
Bacillota
GTC
Asp
>WENV182617622
OJKE01000072
56074
Bacillota
TGA
Ser
>WENV182617728
OJKE01000165
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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