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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182620573
OJKI01008800
179231
Actinomycetota
TAC
Val
>WENV182621380
OJKI01095959
280498
Actinomycetota
GTT
Asn
>WENV182621071
OJKI01047780
140768
Actinomycetota
TAG
Leu
>WENV182621418
OJKI01103204
280549
Actinomycetota
CAC
Val
>WENV182620884
OJKI01025921
280441
Actinomycetota
CCG
Arg
>WENV182621417
OJKI01103204
434162
Actinomycetota
GAC
Val
>WENV182621015
OJKI01041895
176638
Actinomycetota
GGG
Pro
>WENV182621355
OJKI01093259
280523
Actinomycetota
GGC
Ala
>WENV182620435
OJKI01004892
175872
Actinomycetota
GTC
Asp
>WENV182621099
OJKI01051008
20209
Actinomycetota
GAG
Leu
>WENV182621067
OJKI01047435
203883
Actinomycetota
TCT
Arg
>WENV182620495
OJKI01006300
104211
Actinomycetota
CAG
Leu
>WENV182620873
OJKI01025408
147796
Actinomycetota
TAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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