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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182644797
OJLY01000386
20224
Gammaproteobacteria
CGA
Ser
>WENV182644902
OJLY01000724
8507
Gammaproteobacteria
GCT
Ser
>WENV182644792
OJLY01000386
176057
Gammaproteobacteria
GTG
His
>WENV182644833
OJLY01000528
73421
Gammaproteobacteria
TAA
Leu
>WENV182645010
OJLY01001463
280676
Gammaproteobacteria
CGC
Ala
>WENV182644898
OJLY01000697
176048
Gammaproteobacteria
GGG
Pro
>WENV182644698
OJLY01000175
480368
Gammaproteobacteria
CCC
Gly
>WENV182644795
OJLY01000386
398939
Gammaproteobacteria
TAC
Val
>WENV182644794
OJLY01000386
117771
Gammaproteobacteria
TAG
Leu
>WENV182645283
OJLY01007497
176051
Gammaproteobacteria
>WENV182644884
OJLY01000611
280687
Gammaproteobacteria
TTC
Glu
>WENV182644886
OJLY01000611
280687
Gammaproteobacteria
TTC
Glu
>WENV182644615
OJLY01000059
86665
Gammaproteobacteria
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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