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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
71 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182670477
OJNL01000140
295385
Bacteroidota
CCA
Trp
>WENV182670919
OJNL01005519
295385
Bacteroidota
CCA
Trp
>WENV182671015
OJNL01008544
285360
Bacteroidota
TTT
Lys
>WENV182670849
OJNL01003716
117741
Bacteroidota
TAG
Leu
>WENV182670975
OJNL01006882
398829
Bacteroidota
CCT
Arg
>WENV182670814
OJNL01003137
175838
Bacteroidota
GTT
Asn
>WENV182671013
OJNL01008476
404226
Bacteroidota
CCT
Arg
>WENV182671126
OJNL01013919
289031
Bacteroidota
CAT
Met
>WENV182670523
OJNL01000249
280553
Bacteroidota
TTT
Lys
>WENV182670668
OJNL01001106
280557
Bacteroidota
CAT
Met
>WENV182670575
OJNL01000497
280557
Bacteroidota
CAT
Met
>WENV182671292
OJNL01032449
20206
Bacteroidota
GGA
Ser
>WENV182670865
OJNL01003972
483416
Bacteroidota
CTG
Gln
>WENV182671014
OJNL01008476
398871
Bacteroidota
TTC
Glu
>WENV182670472
OJNL01000135
56493
Bacteroidota
TGA
Ser
>WENV182670941
OJNL01006074
175903
Bacteroidota
GTG
His
>WENV182671199
OJNL01019771
291612
Bacteroidota
>WENV182670787
OJNL01002556
291612
Bacteroidota
>WENV182671099
OJNL01012942
118089
Bacteroidota
TAG
Leu
>WENV182670571
OJNL01000461
280530
Bacteroidota
CCA
Trp
>WENV182670732
OJNL01001825
175936
Bacteroidota
CAT
Met
>WENV182670763
OJNL01002132
203954
Bacteroidota
GTC
Asp
>WENV182670762
OJNL01002116
178907
Bacteroidota
TCT
Arg
>WENV182671102
OJNL01013006
405877
Bacteroidota
GGT
Thr
>WENV182671111
OJNL01013440
182267
Bacteroidota
GTT
Asn
>WENV182670725
OJNL01001775
20449
Bacteroidota
GGA
Ser
>WENV182671302
OJNL01034992
404663
Bacteroidota
GGT
Thr
>WENV182670433
OJNL01000100
56072
Bacteroidota
TAA
Leu
>WENV182670848
OJNL01003709
57807
Bacteroidota
TGA
Ser
>WENV182670692
OJNL01001329
57807
Bacteroidota
TGA
Ser
>WENV182671255
OJNL01025764
175886
Bacteroidota
GGC
Ala
>WENV182671204
OJNL01020344
175902
Bacteroidota
GGC
Ala
>WENV182670967
OJNL01006607
179697
Bacteroidota
TGT
Thr
>WENV182671094
OJNL01012797
480404
Bacteroidota
TTG
Gln
>WENV182670533
OJNL01000265
480404
Bacteroidota
TTG
Gln
>WENV182670630
OJNL01000797
280451
Bacteroidota
CGT
Thr
>WENV182670879
OJNL01004332
99847
Bacteroidota
GTA
Tyr
>WENV182670715
OJNL01001710
99847
Bacteroidota
GTA
Tyr
>WENV182670627
OJNL01000789
99847
Bacteroidota
GTA
Tyr
>WENV182671158
OJNL01016750
399200
Bacteroidota
CAT
Met
>WENV182671010
OJNL01008288
186874
Bacteroidota
CAT
Met
>WENV182670972
OJNL01006835
180199
Bacteroidota
CAT
Met
>WENV182670781
OJNL01002334
488746
Bacteroidota
CTG
Gln
>WENV182670944
OJNL01006130
399026
Bacteroidota
CCT
Arg
>WENV182671016
OJNL01008546
186108
Bacteroidota
GTT
Asn
>WENV182670707
OJNL01001547
186108
Bacteroidota
GTT
Asn
>WENV182670367
OJNL01000010
280532
Bacteroidota
>WENV182670825
OJNL01003385
73011
Bacteroidota
CAA
Leu
>WENV182671378
OJNL01046424
183889
Bacteroidota
GGC
Ala
>WENV182670447
OJNL01000113
480318
Bacteroidota
CTG
Gln
>WENV182671209
OJNL01021010
186142
Bacteroidota
GAT
Ile
>WENV182671161
OJNL01017396
398828
Bacteroidota
CCG
Arg
>WENV182670724
OJNL01001762
74084
Bacteroidota
CAG
Leu
>WENV182670678
OJNL01001170
480325
Bacteroidota
CTG
Gln
>WENV182670652
OJNL01000923
176192
Bacteroidota
TCT
Arg
>WENV182670606
OJNL01000680
176192
Bacteroidota
TCT
Arg
>WENV182670648
OJNL01000884
280446
Bacteroidota
TTT
Lys
>WENV182670427
OJNL01000088
280446
Bacteroidota
TTT
Lys
>WENV182670751
OJNL01001977
295349
Bacteroidota
CCA
Trp
>WENV182670542
OJNL01000319
484496
Bacteroidota
TTG
Gln
>WENV182670509
OJNL01000229
484496
Bacteroidota
TTG
Gln
>WENV182670459
OJNL01000124
484496
Bacteroidota
TTG
Gln
>WENV182670412
OJNL01000058
484496
Bacteroidota
TTG
Gln
>WENV182670689
OJNL01001313
285750
Bacteroidota
CCC
Gly
>WENV182670683
OJNL01001239
188555
Bacteroidota
CAT
Met
>WENV182670654
OJNL01000945
117804
Bacteroidota
TAG
Leu
>WENV182671210
OJNL01021010
186143
Bacteroidota
TGC
Ala
>WENV182670729
OJNL01001803
398836
Bacteroidota
GCA
Cys
>WENV182670582
OJNL01000550
398836
Bacteroidota
GCA
Cys
>WENV182670549
OJNL01000344
398836
Bacteroidota
GCA
Cys
>WENV182670495
OJNL01000194
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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