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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
81 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182686458
OJNZ01010772
99852
Bacillota
GTA
Tyr
>WENV182686620
OJNZ01024220
343590
Bacillota
GCC
Gly
>WENV182686775
OJNZ01039470
343590
Bacillota
GCC
Gly
>WENV182686560
OJNZ01018684
280500
Bacillota
TGC
Ala
>WENV182686333
OJNZ01005919
349107
Bacillota
GCC
Gly
>WENV182686334
OJNZ01005919
405363
Bacillota
GCA
Cys
>WENV182686332
OJNZ01005919
280428
Bacillota
GAA
Phe
>WENV182686532
OJNZ01016634
179917
Bacillota
CAT
Met
>WENV182686533
OJNZ01016634
302145
Bacillota
GAA
Phe
>WENV182686084
OJNZ01001530
284746
Bacillota
CTG
Gln
>WENV182685829
OJNZ01000277
280492
Bacillota
CTT
Lys
>WENV182686070
OJNZ01001447
175842
Bacillota
CAC
Val
>WENV182686641
OJNZ01025796
184497
Bacillota
GGG
Pro
>WENV182686436
OJNZ01009648
179563
Bacillota
GAT
Ile
>WENV182686442
OJNZ01009931
179176
Bacillota
ACG
Arg
>WENV182686044
OJNZ01001262
190476
Bacillota
CAT
Met
>WENV182686057
OJNZ01001347
73664
Bacillota
CAG
Leu
>WENV182686256
OJNZ01003752
280447
Bacillota
GAC
Val
>WENV182686019
OJNZ01001116
312274
Bacillota
GGC
Ala
>WENV182685911
OJNZ01000535
186123
Bacillota
GTC
Asp
>WENV182685942
OJNZ01000671
73009
Bacillota
CAG
Leu
>WENV182686553
OJNZ01018116
481217
Bacillota
GCA
Cys
>WENV182686394
OJNZ01007801
189473
Bacillota
GAT
Ile
>WENV182686236
OJNZ01003225
291581
Bacillota
CGG
Pro
>WENV182685976
OJNZ01000840
175859
Bacillota
TCT
Arg
>WENV182686184
OJNZ01002307
290325
Bacillota
GCC
Gly
>WENV182685904
OJNZ01000512
175831
Bacillota
ACG
Arg
>WENV182685953
OJNZ01000688
284627
Bacillota
GAA
Phe
>WENV182685912
OJNZ01000535
291634
Bacillota
GAA
Phe
>WENV182686306
OJNZ01005070
346451
Bacillota
TTT
Lys
>WENV182686205
OJNZ01002693
346451
Bacillota
TTT
Lys
>WENV182686235
OJNZ01003225
480322
Bacillota
CTG
Gln
>WENV182685979
OJNZ01000851
480322
Bacillota
CTG
Gln
>WENV182686861
OJNZ01056184
187364
Bacillota
CAT
Met
>WENV182686133
OJNZ01001811
175868
Bacillota
GTT
Asn
>WENV182686089
OJNZ01001574
284744
Bacillota
TTT
Lys
>WENV182686680
OJNZ01029237
322848
Bacillota
CTT
Lys
>WENV182686679
OJNZ01029237
398854
Bacillota
CTC
Glu
>WENV182686421
OJNZ01008907
291576
Bacillota
CCC
Gly
>WENV182686276
OJNZ01004191
480324
Bacillota
TTG
Gln
>WENV182686769
OJNZ01039136
497729
Bacillota
CCA
Trp
>WENV182686580
OJNZ01020436
497729
Bacillota
CCA
Trp
>WENV182686388
OJNZ01007675
175899
Bacillota
GTC
Asp
>WENV182685625
OJNZ01000017
303718
Bacillota
TGT
Thr
>WENV182686056
OJNZ01001347
56079
Bacillota
AAG
Leu
>WENV182686443
OJNZ01009943
323864
Bacillota
TGC
Ala
>WENV182686911
OJNZ01072461
292374
Bacillota
TGC
Ala
>WENV182686092
OJNZ01001574
179935
Bacillota
GTC
Asp
>WENV182686101
OJNZ01001574
179935
Bacillota
GTC
Asp
>WENV182686653
OJNZ01026489
186051
Bacillota
GAT
Ile
>WENV182686791
OJNZ01042154
398857
Bacillota
TTC
Glu
>WENV182686249
OJNZ01003597
204381
Bacillota
GAT
Ile
>WENV182686026
OJNZ01001130
204381
Bacillota
GAT
Ile
>WENV182685725
OJNZ01000095
117745
Bacillota
GTA
Tyr
>WENV182686326
OJNZ01005575
280444
Bacillota
GGT
Thr
>WENV182686309
OJNZ01005187
280444
Bacillota
GGT
Thr
>WENV182685705
OJNZ01000066
317482
Bacillota
TAC
Val
>WENV182686554
OJNZ01018136
483485
Bacillota
CCC
Gly
>WENV182685980
OJNZ01000852
46643
Bacillota
TGA
Ser
>WENV182686154
OJNZ01001946
179755
Bacillota
CCG
Arg
>WENV182686099
OJNZ01001574
401111
Bacillota
TTC
Glu
>WENV182686090
OJNZ01001574
401111
Bacillota
TTC
Glu
>WENV182686102
OJNZ01001574
284742
Bacillota
GAA
Phe
>WENV182686093
OJNZ01001574
284742
Bacillota
GAA
Phe
>WENV182686045
OJNZ01001262
398832
Bacillota
TTC
Glu
>WENV182686933
OJNZ01076156
25955
Bacillota
GCT
Ser
>WENV182685951
OJNZ01000688
118669
Bacillota
GTA
Tyr
>WENV182685925
OJNZ01000601
280462
Bacillota
GAA
Phe
>WENV182685620
OJNZ01000013
398852
Bacillota
CTC
Glu
>WENV182686910
OJNZ01072461
201856
Bacillota
GAT
Ile
>WENV182686597
OJNZ01021711
289123
Bacillota
GGT
Thr
>WENV182685987
OJNZ01000874
321248
Bacillota
TAC
Val
>WENV182686398
OJNZ01007957
184539
Bacillota
TCT
Arg
>WENV182685714
OJNZ01000079
280483
Bacillota
GAA
Phe
>WENV182685858
OJNZ01000338
285601
Bacillota
TTC
Glu
>WENV182685772
OJNZ01000162
175857
Bacillota
GTG
His
>WENV182685715
OJNZ01000079
285756
Bacillota
GCC
Gly
>WENV182685991
OJNZ01000902
398833
Bacillota
TGT
Thr
>WENV182685926
OJNZ01000601
280463
Bacillota
TTT
Lys
>WENV182685902
OJNZ01000500
405393
Bacillota
GCC
Gly
>WENV182686215
OJNZ01002856
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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