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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
64 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182701262
OJOP01007896
117741
Bacteroidota
TAG
Leu
>WENV182701326
OJOP01010881
404226
Bacteroidota
CCT
Arg
>WENV182700999
OJOP01001354
175904
Bacteroidota
CGG
Pro
>WENV182700603
OJOP01000020
289031
Bacteroidota
CAT
Met
>WENV182700876
OJOP01000572
289031
Bacteroidota
CAT
Met
>WENV182701180
OJOP01004426
280553
Bacteroidota
TTT
Lys
>WENV182700973
OJOP01001146
280557
Bacteroidota
CAT
Met
>WENV182700599
OJOP01000018
280557
Bacteroidota
CAT
Met
>WENV182701048
OJOP01002004
483416
Bacteroidota
CTG
Gln
>WENV182700579
OJOP01000002
483416
Bacteroidota
CTG
Gln
>WENV182701362
OJOP01013063
398871
Bacteroidota
TTC
Glu
>WENV182701047
OJOP01001975
56493
Bacteroidota
TGA
Ser
>WENV182701164
OJOP01004073
175906
Bacteroidota
GTG
His
>WENV182701069
OJOP01002407
175903
Bacteroidota
GTG
His
>WENV182700775
OJOP01000289
175903
Bacteroidota
GTG
His
>WENV182701161
OJOP01004039
351598
Bacteroidota
CGG
Pro
>WENV182700919
OJOP01000792
351598
Bacteroidota
CGG
Pro
>WENV182700687
OJOP01000123
351598
Bacteroidota
CGG
Pro
>WENV182700960
OJOP01000963
156068
Bacteroidota
TAC
Val
>WENV182700972
OJOP01001125
118089
Bacteroidota
TAG
Leu
>WENV182701233
OJOP01006586
175908
Bacteroidota
GTC
Asp
>WENV182701000
OJOP01001354
280530
Bacteroidota
CCA
Trp
>WENV182701557
OJOP01033515
175936
Bacteroidota
CAT
Met
>WENV182701406
OJOP01016566
178907
Bacteroidota
TCT
Arg
>WENV182701451
OJOP01019228
172085
Bacteroidota
TAC
Val
>WENV182700576
OJOP01000001
405877
Bacteroidota
GGT
Thr
>WENV182701459
OJOP01019921
20449
Bacteroidota
GGA
Ser
>WENV182701226
OJOP01005758
178133
Bacteroidota
GAT
Ile
>WENV182700680
OJOP01000108
21127
Bacteroidota
GGA
Ser
>WENV182700861
OJOP01000536
56072
Bacteroidota
TAA
Leu
>WENV182701334
OJOP01011889
175902
Bacteroidota
GGC
Ala
>WENV182701336
OJOP01011920
480404
Bacteroidota
TTG
Gln
>WENV182701042
OJOP01001855
280451
Bacteroidota
CGT
Thr
>WENV182701785
OJOP01078259
418894
Bacteroidota
TTC
Glu
>WENV182701209
OJOP01005186
99847
Bacteroidota
GTA
Tyr
>WENV182701522
OJOP01029375
399200
Bacteroidota
CAT
Met
>WENV182701005
OJOP01001387
186874
Bacteroidota
CAT
Met
>WENV182701001
OJOP01001356
186874
Bacteroidota
CAT
Met
>WENV182700784
OJOP01000302
178179
Bacteroidota
GGC
Ala
>WENV182701549
OJOP01032337
280478
Bacteroidota
GCC
Gly
>WENV182700682
OJOP01000110
187400
Bacteroidota
GTT
Asn
>WENV182700681
OJOP01000110
187400
Bacteroidota
GTT
Asn
>WENV182701371
OJOP01013410
73011
Bacteroidota
CAA
Leu
>WENV182700660
OJOP01000079
480318
Bacteroidota
CTG
Gln
>WENV182701645
OJOP01046784
186142
Bacteroidota
GAT
Ile
>WENV182701113
OJOP01003177
398828
Bacteroidota
CCG
Arg
>WENV182701158
OJOP01003985
74084
Bacteroidota
CAG
Leu
>WENV182701124
OJOP01003450
480325
Bacteroidota
CTG
Gln
>WENV182700990
OJOP01001238
69204
Bacteroidota
TGA
Ser
>WENV182700965
OJOP01000999
280446
Bacteroidota
TTT
Lys
>WENV182700636
OJOP01000058
280446
Bacteroidota
TTT
Lys
>WENV182701599
OJOP01038385
295349
Bacteroidota
CCA
Trp
>WENV182701213
OJOP01005240
484496
Bacteroidota
TTG
Gln
>WENV182700716
OJOP01000193
484496
Bacteroidota
TTG
Gln
>WENV182701096
OJOP01002804
27502
Bacteroidota
GGA
Ser
>WENV182700786
OJOP01000304
27502
Bacteroidota
GGA
Ser
>WENV182701646
OJOP01046784
186143
Bacteroidota
TGC
Ala
>WENV182700952
OJOP01000916
365112
Bacteroidota
TTT
Lys
>WENV182700953
OJOP01000920
398836
Bacteroidota
GCA
Cys
>WENV182700767
OJOP01000257
398836
Bacteroidota
GCA
Cys
>WENV182701263
OJOP01008247
170323
Bacteroidota
GGG
Pro
>WENV182701061
OJOP01002336
170323
Bacteroidota
GGG
Pro
>WENV182700667
OJOP01000095
170323
Bacteroidota
GGG
Pro
>WENV182700650
OJOP01000062
170323
Bacteroidota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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