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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
42 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182710512
OJPD01000184
406043
Verrucomicrobiota
GCA
Cys
>WENV182710514
OJPD01000184
406350
Verrucomicrobiota
TGT
Thr
>WENV182710615
OJPD01000376
148006
Verrucomicrobiota
CAA
Leu
>WENV182710476
OJPD01000134
101600
Verrucomicrobiota
AAG
Leu
>WENV182710639
OJPD01000440
293105
Verrucomicrobiota
CAT
Met
>WENV182710752
OJPD01000971
405901
Verrucomicrobiota
GCC
Gly
>WENV182710596
OJPD01000310
405901
Verrucomicrobiota
GCC
Gly
>WENV182710711
OJPD01000737
483642
Verrucomicrobiota
CCC
Gly
>WENV182710590
OJPD01000288
229220
Verrucomicrobiota
CAT
Met
>WENV182710553
OJPD01000245
8960
Verrucomicrobiota
CGA
Ser
>WENV182710758
OJPD01001003
101463
Verrucomicrobiota
TAA
Leu
>WENV182710469
OJPD01000126
157427
Verrucomicrobiota
GTC
Asp
>WENV182710326
OJPD01000021
157427
Verrucomicrobiota
GTC
Asp
>WENV182710799
OJPD01001258
293079
Verrucomicrobiota
CGC
Ala
>WENV182710713
OJPD01000741
120352
Verrucomicrobiota
TAG
Leu
>WENV182710631
OJPD01000403
292636
Verrucomicrobiota
>WENV182710710
OJPD01000737
489412
Verrucomicrobiota
TCC
Gly
>WENV182710513
OJPD01000184
298263
Verrucomicrobiota
TTC
Glu
>WENV182710457
OJPD01000109
293069
Verrucomicrobiota
CTT
Lys
>WENV182710483
OJPD01000143
406336
Verrucomicrobiota
CCT
Arg
>WENV182710612
OJPD01000365
406369
Verrucomicrobiota
CCG
Arg
>WENV182710337
OJPD01000028
405940
Verrucomicrobiota
GGT
Thr
>WENV182710323
OJPD01000021
406044
Verrucomicrobiota
CTG
Gln
>WENV182710751
OJPD01000966
187556
Verrucomicrobiota
GGG
Pro
>WENV182710638
OJPD01000440
406037
Verrucomicrobiota
GTG
His
>WENV182710324
OJPD01000021
406360
Verrucomicrobiota
GAC
Val
>WENV182710270
OJPD01000002
187548
Verrucomicrobiota
TCT
Arg
>WENV182710456
OJPD01000109
406040
Verrucomicrobiota
CGT
Thr
>WENV182710466
OJPD01000121
57652
Verrucomicrobiota
TGA
Ser
>WENV182710807
OJPD01001361
406039
Verrucomicrobiota
CAC
Val
>WENV182710336
OJPD01000028
75458
Verrucomicrobiota
CAG
Leu
>WENV182710423
OJPD01000069
406368
Verrucomicrobiota
TTG
Gln
>WENV182710703
OJPD01000713
21159
Verrucomicrobiota
GGA
Ser
>WENV182710504
OJPD01000169
101461
Verrucomicrobiota
GTA
Tyr
>WENV182710636
OJPD01000416
293095
Verrucomicrobiota
TTT
Lys
>WENV182710458
OJPD01000109
187561
Verrucomicrobiota
CGG
Pro
>WENV182710465
OJPD01000121
406342
Verrucomicrobiota
CAT
Met
>WENV182711032
OJPD01003659
406351
Verrucomicrobiota
GTT
Asn
>WENV182710424
OJPD01000069
303305
Verrucomicrobiota
GGC
Ala
>WENV182710325
OJPD01000021
406346
Verrucomicrobiota
TAC
Val
>WENV182710632
OJPD01000403
8938
Verrucomicrobiota
GCT
Ser
>WENV182710782
OJPD01001100
186928
Verrucomicrobiota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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