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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
60 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182714710
OJPH01005570
99852
Bacillota
GTA
Tyr
>WENV182714823
OJPH01014742
356775
Bacillota
TGT
Thr
>WENV182714632
OJPH01002364
280500
Bacillota
TGC
Ala
>WENV182714564
OJPH01001358
349107
Bacillota
GCC
Gly
>WENV182714660
OJPH01002943
349107
Bacillota
GCC
Gly
>WENV182714661
OJPH01002943
405363
Bacillota
GCA
Cys
>WENV182714659
OJPH01002943
280428
Bacillota
GAA
Phe
>WENV182714504
OJPH01000845
229015
Bacillota
GTG
His
>WENV182714448
OJPH01000567
179917
Bacillota
CAT
Met
>WENV182714449
OJPH01000567
302145
Bacillota
GAA
Phe
>WENV182714551
OJPH01001310
280492
Bacillota
CTT
Lys
>WENV182714260
OJPH01000117
280492
Bacillota
CTT
Lys
>WENV182714685
OJPH01003953
175842
Bacillota
CAC
Val
>WENV182714441
OJPH01000523
175842
Bacillota
CAC
Val
>WENV182714852
OJPH01019194
348419
Bacillota
GTT
Asn
>WENV182714572
OJPH01001442
190476
Bacillota
CAT
Met
>WENV182714199
OJPH01000054
73664
Bacillota
CAG
Leu
>WENV182714601
OJPH01001939
280447
Bacillota
GAC
Val
>WENV182714571
OJPH01001427
280447
Bacillota
GAC
Val
>WENV182714566
OJPH01001385
280447
Bacillota
GAC
Val
>WENV182714450
OJPH01000570
280447
Bacillota
GAC
Val
>WENV182714817
OJPH01013040
5692
Bacillota
GCT
Ser
>WENV182714677
OJPH01003605
175825
Bacillota
GAT
Ile
>WENV182714521
OJPH01000984
73009
Bacillota
CAG
Leu
>WENV182714790
OJPH01010294
189473
Bacillota
GAT
Ile
>WENV182714475
OJPH01000698
291581
Bacillota
CGG
Pro
>WENV182714598
OJPH01001853
175859
Bacillota
TCT
Arg
>WENV182714676
OJPH01003605
280436
Bacillota
TGC
Ala
>WENV182714243
OJPH01000099
290325
Bacillota
GCC
Gly
>WENV182714421
OJPH01000466
175831
Bacillota
ACG
Arg
>WENV182714503
OJPH01000845
179810
Bacillota
TCT
Arg
>WENV182714474
OJPH01000698
480322
Bacillota
CTG
Gln
>WENV182714464
OJPH01000670
480322
Bacillota
CTG
Gln
>WENV182714631
OJPH01002362
175868
Bacillota
GTT
Asn
>WENV182714546
OJPH01001276
398854
Bacillota
CTC
Glu
>WENV182714663
OJPH01003194
291576
Bacillota
CCC
Gly
>WENV182714384
OJPH01000346
291576
Bacillota
CCC
Gly
>WENV182714694
OJPH01004253
287280
Bacillota
TGT
Thr
>WENV182714498
OJPH01000836
480324
Bacillota
TTG
Gln
>WENV182714755
OJPH01007955
497729
Bacillota
CCA
Trp
>WENV182714542
OJPH01001233
303718
Bacillota
TGT
Thr
>WENV182714198
OJPH01000054
56079
Bacillota
AAG
Leu
>WENV182714197
OJPH01000054
56079
Bacillota
AAG
Leu
>WENV182714642
OJPH01002532
323864
Bacillota
TGC
Ala
>WENV182714834
OJPH01016258
398857
Bacillota
TTC
Glu
>WENV182714163
OJPH01000025
117745
Bacillota
GTA
Tyr
>WENV182714620
OJPH01002190
280444
Bacillota
GGT
Thr
>WENV182714469
OJPH01000695
46643
Bacillota
TGA
Ser
>WENV182714858
OJPH01020934
223045
Bacillota
GAT
Ile
>WENV182714558
OJPH01001325
179755
Bacillota
CCG
Arg
>WENV182714782
OJPH01009285
46835
Bacillota
TAA
Leu
>WENV182714573
OJPH01001442
398832
Bacillota
TTC
Glu
>WENV182714205
OJPH01000060
280462
Bacillota
GAA
Phe
>WENV182714455
OJPH01000589
398852
Bacillota
CTC
Glu
>WENV182714356
OJPH01000270
398852
Bacillota
CTC
Glu
>WENV182714351
OJPH01000252
175857
Bacillota
GTG
His
>WENV182714619
OJPH01002190
175849
Bacillota
GTC
Asp
>WENV182714353
OJPH01000252
280463
Bacillota
TTT
Lys
>WENV182714816
OJPH01013040
56074
Bacillota
TGA
Ser
>WENV182714559
OJPH01001326
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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