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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
43 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182716104
OJPJ01000384
295385
Bacteroidota
CCA
Trp
>WENV182716121
OJPJ01000426
117741
Bacteroidota
TAG
Leu
>WENV182715990
OJPJ01000076
398829
Bacteroidota
CCT
Arg
>WENV182715976
OJPJ01000050
175838
Bacteroidota
GTT
Asn
>WENV182716168
OJPJ01000742
175838
Bacteroidota
GTT
Asn
>WENV182716131
OJPJ01000474
289031
Bacteroidota
CAT
Met
>WENV182716062
OJPJ01000252
280553
Bacteroidota
TTT
Lys
>WENV182716379
OJPJ01003978
280557
Bacteroidota
CAT
Met
>WENV182716003
OJPJ01000095
280557
Bacteroidota
CAT
Met
>WENV182715948
OJPJ01000005
280557
Bacteroidota
CAT
Met
>WENV182716273
OJPJ01001815
20206
Bacteroidota
GGA
Ser
>WENV182716157
OJPJ01000642
483416
Bacteroidota
CTG
Gln
>WENV182716222
OJPJ01001283
56493
Bacteroidota
TGA
Ser
>WENV182716166
OJPJ01000733
56493
Bacteroidota
TGA
Ser
>WENV182716136
OJPJ01000497
56493
Bacteroidota
TGA
Ser
>WENV182716004
OJPJ01000108
175903
Bacteroidota
GTG
His
>WENV182716067
OJPJ01000286
156406
Bacteroidota
TAC
Val
>WENV182716120
OJPJ01000421
182267
Bacteroidota
GTT
Asn
>WENV182716260
OJPJ01001644
21127
Bacteroidota
GGA
Ser
>WENV182716234
OJPJ01001411
56072
Bacteroidota
TAA
Leu
>WENV182715978
OJPJ01000050
56072
Bacteroidota
TAA
Leu
>WENV182716346
OJPJ01003145
57807
Bacteroidota
TGA
Ser
>WENV182716257
OJPJ01001602
57807
Bacteroidota
TGA
Ser
>WENV182716087
OJPJ01000313
57807
Bacteroidota
TGA
Ser
>WENV182715960
OJPJ01000028
57807
Bacteroidota
TGA
Ser
>WENV182716007
OJPJ01000112
175902
Bacteroidota
GGC
Ala
>WENV182716206
OJPJ01001152
480404
Bacteroidota
TTG
Gln
>WENV182715950
OJPJ01000008
280451
Bacteroidota
CGT
Thr
>WENV182716396
OJPJ01004433
99847
Bacteroidota
GTA
Tyr
>WENV182716170
OJPJ01000742
99847
Bacteroidota
GTA
Tyr
>WENV182715972
OJPJ01000043
99847
Bacteroidota
GTA
Tyr
>WENV182716174
OJPJ01000814
186874
Bacteroidota
CAT
Met
>WENV182716670
OJPJ01035136
186108
Bacteroidota
GTT
Asn
>WENV182716369
OJPJ01003674
186142
Bacteroidota
GAT
Ile
>WENV182716023
OJPJ01000152
398828
Bacteroidota
CCG
Arg
>WENV182716032
OJPJ01000174
280446
Bacteroidota
TTT
Lys
>WENV182716020
OJPJ01000145
280446
Bacteroidota
TTT
Lys
>WENV182715952
OJPJ01000015
280446
Bacteroidota
TTT
Lys
>WENV182716158
OJPJ01000645
484496
Bacteroidota
TTG
Gln
>WENV182715981
OJPJ01000059
484496
Bacteroidota
TTG
Gln
>WENV182716370
OJPJ01003674
186143
Bacteroidota
TGC
Ala
>WENV182716161
OJPJ01000690
398836
Bacteroidota
GCA
Cys
>WENV182715969
OJPJ01000042
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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