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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
42 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182720825
OJPO01000101
117741
Bacteroidota
TAG
Leu
>WENV182721033
OJPO01000704
398829
Bacteroidota
CCT
Arg
>WENV182721399
OJPO01008692
175838
Bacteroidota
GTT
Asn
>WENV182721258
OJPO01003523
280553
Bacteroidota
TTT
Lys
>WENV182720812
OJPO01000083
280557
Bacteroidota
CAT
Met
>WENV182720961
OJPO01000378
20206
Bacteroidota
GGA
Ser
>WENV182720978
OJPO01000446
398871
Bacteroidota
TTC
Glu
>WENV182720813
OJPO01000084
56493
Bacteroidota
TGA
Ser
>WENV182721348
OJPO01006368
175906
Bacteroidota
GTG
His
>WENV182720882
OJPO01000192
175903
Bacteroidota
GTG
His
>WENV182721151
OJPO01001867
118089
Bacteroidota
TAG
Leu
>WENV182720990
OJPO01000505
203954
Bacteroidota
GTC
Asp
>WENV182721067
OJPO01000888
178907
Bacteroidota
TCT
Arg
>WENV182721260
OJPO01003605
20449
Bacteroidota
GGA
Ser
>WENV182721140
OJPO01001737
56072
Bacteroidota
TAA
Leu
>WENV182720830
OJPO01000110
56072
Bacteroidota
TAA
Leu
>WENV182721010
OJPO01000579
57807
Bacteroidota
TGA
Ser
>WENV182720885
OJPO01000198
175902
Bacteroidota
GGC
Ala
>WENV182721332
OJPO01005486
398860
Bacteroidota
CTC
Glu
>WENV182721197
OJPO01002352
480404
Bacteroidota
TTG
Gln
>WENV182721185
OJPO01002269
99847
Bacteroidota
GTA
Tyr
>WENV182721127
OJPO01001434
99847
Bacteroidota
GTA
Tyr
>WENV182721228
OJPO01002731
399200
Bacteroidota
CAT
Met
>WENV182721096
OJPO01001139
399200
Bacteroidota
CAT
Met
>WENV182720947
OJPO01000320
332896
Bacteroidota
TTT
Lys
>WENV182721162
OJPO01001956
488746
Bacteroidota
CTG
Gln
>WENV182720953
OJPO01000335
488746
Bacteroidota
CTG
Gln
>WENV182721109
OJPO01001267
280478
Bacteroidota
GCC
Gly
>WENV182720966
OJPO01000391
20766
Bacteroidota
GGA
Ser
>WENV182721286
OJPO01004794
158068
Bacteroidota
GGG
Pro
>WENV182721474
OJPO01016780
186142
Bacteroidota
GAT
Ile
>WENV182721037
OJPO01000731
398828
Bacteroidota
CCG
Arg
>WENV182721090
OJPO01001090
74084
Bacteroidota
CAG
Leu
>WENV182721112
OJPO01001275
159415
Bacteroidota
TAC
Val
>WENV182721277
OJPO01004109
400088
Bacteroidota
GGT
Thr
>WENV182721027
OJPO01000669
280446
Bacteroidota
TTT
Lys
>WENV182721019
OJPO01000645
280446
Bacteroidota
TTT
Lys
>WENV182720798
OJPO01000073
280446
Bacteroidota
TTT
Lys
>WENV182720797
OJPO01000072
484496
Bacteroidota
TTG
Gln
>WENV182721329
OJPO01005450
285750
Bacteroidota
CCC
Gly
>WENV182721475
OJPO01016780
186143
Bacteroidota
TGC
Ala
>WENV182721030
OJPO01000679
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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