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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
61 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182738969
OJQK01001558
234991
Bacillota
GAT
Ile
>WENV182739253
OJQK01021503
280500
Bacillota
TGC
Ala
>WENV182739112
OJQK01005858
349107
Bacillota
GCC
Gly
>WENV182739115
OJQK01005858
349107
Bacillota
GCC
Gly
>WENV182739283
OJQK01024361
349107
Bacillota
GCC
Gly
>WENV182739284
OJQK01024361
405363
Bacillota
GCA
Cys
>WENV182739114
OJQK01005858
280428
Bacillota
GAA
Phe
>WENV182739082
OJQK01004034
229015
Bacillota
GTG
His
>WENV182739104
OJQK01005558
179917
Bacillota
CAT
Met
>WENV182739302
OJQK01027796
175842
Bacillota
CAC
Val
>WENV182739158
OJQK01008534
295166
Bacillota
TGC
Ala
>WENV182738968
OJQK01001558
295166
Bacillota
TGC
Ala
>WENV182739223
OJQK01017816
215243
Bacillota
CAT
Met
>WENV182738848
OJQK01000396
190476
Bacillota
CAT
Met
>WENV182739150
OJQK01007760
280447
Bacillota
GAC
Val
>WENV182738999
OJQK01002176
280447
Bacillota
GAC
Val
>WENV182739209
OJQK01014587
5692
Bacillota
GCT
Ser
>WENV182739022
OJQK01002584
186123
Bacillota
GTC
Asp
>WENV182739317
OJQK01031035
284723
Bacillota
TAC
Val
>WENV182739232
OJQK01018596
284723
Bacillota
TAC
Val
>WENV182739148
OJQK01007518
284723
Bacillota
TAC
Val
>WENV182738938
OJQK01001162
73009
Bacillota
CAG
Leu
>WENV182739075
OJQK01003802
407726
Bacillota
CTG
Gln
>WENV182739011
OJQK01002292
291581
Bacillota
CGG
Pro
>WENV182738943
OJQK01001216
175859
Bacillota
TCT
Arg
>WENV182739212
OJQK01014723
398835
Bacillota
GCC
Gly
>WENV182739176
OJQK01010733
398835
Bacillota
GCC
Gly
>WENV182739023
OJQK01002584
291634
Bacillota
GAA
Phe
>WENV182738964
OJQK01001491
346451
Bacillota
TTT
Lys
>WENV182739010
OJQK01002292
480322
Bacillota
CTG
Gln
>WENV182738939
OJQK01001170
480322
Bacillota
CTG
Gln
>WENV182739233
OJQK01018596
187364
Bacillota
CAT
Met
>WENV182739025
OJQK01002634
175868
Bacillota
GTT
Asn
>WENV182739024
OJQK01002634
398854
Bacillota
CTC
Glu
>WENV182738958
OJQK01001389
291576
Bacillota
CCC
Gly
>WENV182738623
OJQK01000002
497729
Bacillota
CCA
Trp
>WENV182739274
OJQK01023653
175911
Bacillota
GTC
Asp
>WENV182739303
OJQK01027923
186051
Bacillota
GAT
Ile
>WENV182739229
OJQK01018198
398857
Bacillota
TTC
Glu
>WENV182738874
OJQK01000586
280444
Bacillota
GGT
Thr
>WENV182739063
OJQK01003471
179755
Bacillota
CCG
Arg
>WENV182739261
OJQK01022040
58120
Bacillota
AAG
Leu
>WENV182738954
OJQK01001314
46835
Bacillota
TAA
Leu
>WENV182738849
OJQK01000396
398832
Bacillota
TTC
Glu
>WENV182739333
OJQK01033105
175915
Bacillota
GTC
Asp
>WENV182739100
OJQK01005473
175915
Bacillota
GTC
Asp
>WENV182739296
OJQK01026290
283367
Bacillota
GCC
Gly
>WENV182739046
OJQK01003150
280476
Bacillota
TTT
Lys
>WENV182739311
OJQK01029915
201856
Bacillota
GAT
Ile
>WENV182738978
OJQK01001726
289123
Bacillota
GGT
Thr
>WENV182738793
OJQK01000245
321248
Bacillota
TAC
Val
>WENV182738655
OJQK01000015
321248
Bacillota
TAC
Val
>WENV182738634
OJQK01000008
321248
Bacillota
TAC
Val
>WENV182738921
OJQK01000904
175857
Bacillota
GTG
His
>WENV182739113
OJQK01005858
175849
Bacillota
GTC
Asp
>WENV182738873
OJQK01000586
175849
Bacillota
GTC
Asp
>WENV182739043
OJQK01003150
179166
Bacillota
TCT
Arg
>WENV182739126
OJQK01006692
280486
Bacillota
TGC
Ala
>WENV182738988
OJQK01001842
405393
Bacillota
GCC
Gly
>WENV182739208
OJQK01014587
56074
Bacillota
TGA
Ser
>WENV182738971
OJQK01001627
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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