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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
42 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182749616
OJQY01000295
172207
Bacteroidota
GGG
Pro
>WENV182749628
OJQY01000351
295385
Bacteroidota
CCA
Trp
>WENV182749500
OJQY01000076
117741
Bacteroidota
TAG
Leu
>WENV182749453
OJQY01000026
398829
Bacteroidota
CCT
Arg
>WENV182749692
OJQY01000641
175838
Bacteroidota
GTT
Asn
>WENV182749507
OJQY01000079
289031
Bacteroidota
CAT
Met
>WENV182749561
OJQY01000184
280553
Bacteroidota
TTT
Lys
>WENV182749854
OJQY01005132
280557
Bacteroidota
CAT
Met
>WENV182749640
OJQY01000381
20206
Bacteroidota
GGA
Ser
>WENV182749841
OJQY01004190
483416
Bacteroidota
CTG
Gln
>WENV182749517
OJQY01000097
483416
Bacteroidota
CTG
Gln
>WENV182749614
OJQY01000294
201819
Bacteroidota
CAT
Met
>WENV182749655
OJQY01000468
56493
Bacteroidota
TGA
Ser
>WENV182749549
OJQY01000149
175903
Bacteroidota
GTG
His
>WENV182749621
OJQY01000322
351598
Bacteroidota
CGG
Pro
>WENV182749475
OJQY01000042
351598
Bacteroidota
CGG
Pro
>WENV182749435
OJQY01000014
351598
Bacteroidota
CGG
Pro
>WENV182749716
OJQY01000974
405877
Bacteroidota
GGT
Thr
>WENV182749552
OJQY01000158
21127
Bacteroidota
GGA
Ser
>WENV182749452
OJQY01000026
56072
Bacteroidota
TAA
Leu
>WENV182749732
OJQY01001132
57807
Bacteroidota
TGA
Ser
>WENV182749551
OJQY01000157
175902
Bacteroidota
GGC
Ala
>WENV182749703
OJQY01000794
480404
Bacteroidota
TTG
Gln
>WENV182749485
OJQY01000051
280451
Bacteroidota
CGT
Thr
>WENV182749859
OJQY01005359
99847
Bacteroidota
GTA
Tyr
>WENV182749599
OJQY01000238
99847
Bacteroidota
GTA
Tyr
>WENV182749479
OJQY01000045
99847
Bacteroidota
GTA
Tyr
>WENV182749501
OJQY01000078
186874
Bacteroidota
CAT
Met
>WENV182749617
OJQY01000295
488746
Bacteroidota
CTG
Gln
>WENV182749531
OJQY01000112
398828
Bacteroidota
CCG
Arg
>WENV182749644
OJQY01000403
69204
Bacteroidota
TGA
Ser
>WENV182749618
OJQY01000297
280446
Bacteroidota
TTT
Lys
>WENV182749924
OJQY01015982
484496
Bacteroidota
TTG
Gln
>WENV182749796
OJQY01002504
484496
Bacteroidota
TTG
Gln
>WENV182749563
OJQY01000189
484496
Bacteroidota
TTG
Gln
>WENV182749674
OJQY01000551
27502
Bacteroidota
GGA
Ser
>WENV182749560
OJQY01000176
365112
Bacteroidota
TTT
Lys
>WENV182749482
OJQY01000047
365112
Bacteroidota
TTT
Lys
>WENV182749870
OJQY01005943
398836
Bacteroidota
GCA
Cys
>WENV182749865
OJQY01005549
398836
Bacteroidota
GCA
Cys
>WENV182749693
OJQY01000656
398836
Bacteroidota
GCA
Cys
>WENV182749446
OJQY01000019
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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