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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
92 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182750273
OJQZ01000380
99852
Bacillota
GTA
Tyr
>WENV182750280
OJQZ01000389
99852
Bacillota
GTA
Tyr
>WENV182750403
OJQZ01000772
405363
Bacillota
GCA
Cys
>WENV182750869
OJQZ01007606
405363
Bacillota
GCA
Cys
>WENV182751007
OJQZ01020646
405363
Bacillota
GCA
Cys
>WENV182751046
OJQZ01027043
405363
Bacillota
GCA
Cys
>WENV182750142
OJQZ01000183
290391
Bacillota
TAC
Val
>WENV182750412
OJQZ01000828
290391
Bacillota
TAC
Val
>WENV182750635
OJQZ01002094
290391
Bacillota
TAC
Val
>WENV182750683
OJQZ01002699
290391
Bacillota
TAC
Val
>WENV182750698
OJQZ01002894
290391
Bacillota
TAC
Val
>WENV182750710
OJQZ01003023
280428
Bacillota
GAA
Phe
>WENV182750763
OJQZ01004032
280428
Bacillota
GAA
Phe
>WENV182751018
OJQZ01021957
280428
Bacillota
GAA
Phe
>WENV182750152
OJQZ01000192
175842
Bacillota
CAC
Val
>WENV182750613
OJQZ01001919
175842
Bacillota
CAC
Val
>WENV182750760
OJQZ01003949
175842
Bacillota
CAC
Val
>WENV182751083
OJQZ01035852
184497
Bacillota
GGG
Pro
>WENV182750834
OJQZ01006210
194260
Bacillota
GAT
Ile
>WENV182750775
OJQZ01004227
179563
Bacillota
GAT
Ile
>WENV182751000
OJQZ01019583
179176
Bacillota
ACG
Arg
>WENV182750592
OJQZ01001744
190476
Bacillota
CAT
Met
>WENV182750917
OJQZ01010821
82124
Bacillota
TAA
Leu
>WENV182750423
OJQZ01000870
280447
Bacillota
GAC
Val
>WENV182750161
OJQZ01000208
280447
Bacillota
GAC
Val
>WENV182751001
OJQZ01019606
280447
Bacillota
GAC
Val
>WENV182750675
OJQZ01002532
280447
Bacillota
GAC
Val
>WENV182750245
OJQZ01000317
5692
Bacillota
GCT
Ser
>WENV182750234
OJQZ01000305
5692
Bacillota
GCT
Ser
>WENV182750832
OJQZ01006095
175825
Bacillota
GAT
Ile
>WENV182750720
OJQZ01003052
73009
Bacillota
CAG
Leu
>WENV182750568
OJQZ01001554
73009
Bacillota
CAG
Leu
>WENV182750406
OJQZ01000802
73009
Bacillota
CAG
Leu
>WENV182750269
OJQZ01000371
73009
Bacillota
CAG
Leu
>WENV182750436
OJQZ01000933
481217
Bacillota
GCA
Cys
>WENV182750452
OJQZ01000992
291581
Bacillota
CGG
Pro
>WENV182750058
OJQZ01000068
291581
Bacillota
CGG
Pro
>WENV182750566
OJQZ01001554
175859
Bacillota
TCT
Arg
>WENV182750136
OJQZ01000176
175859
Bacillota
TCT
Arg
>WENV182750831
OJQZ01006095
280436
Bacillota
TGC
Ala
>WENV182750686
OJQZ01002699
290325
Bacillota
GCC
Gly
>WENV182750095
OJQZ01000113
290325
Bacillota
GCC
Gly
>WENV182750709
OJQZ01003010
175831
Bacillota
ACG
Arg
>WENV182750576
OJQZ01001631
175831
Bacillota
ACG
Arg
>WENV182750344
OJQZ01000564
175831
Bacillota
ACG
Arg
>WENV182750451
OJQZ01000992
480322
Bacillota
CTG
Gln
>WENV182750329
OJQZ01000501
480322
Bacillota
CTG
Gln
>WENV182750064
OJQZ01000070
480322
Bacillota
CTG
Gln
>WENV182750057
OJQZ01000068
480322
Bacillota
CTG
Gln
>WENV182750467
OJQZ01001032
175868
Bacillota
GTT
Asn
>WENV182750379
OJQZ01000673
175868
Bacillota
GTT
Asn
>WENV182750348
OJQZ01000576
175868
Bacillota
GTT
Asn
>WENV182750281
OJQZ01000389
175868
Bacillota
GTT
Asn
>WENV182750606
OJQZ01001867
322848
Bacillota
CTT
Lys
>WENV182750444
OJQZ01000959
322848
Bacillota
CTT
Lys
>WENV182750242
OJQZ01000314
322848
Bacillota
CTT
Lys
>WENV182750378
OJQZ01000673
398854
Bacillota
CTC
Glu
>WENV182750347
OJQZ01000576
398854
Bacillota
CTC
Glu
>WENV182750241
OJQZ01000314
398854
Bacillota
CTC
Glu
>WENV182750388
OJQZ01000704
291576
Bacillota
CCC
Gly
>WENV182750574
OJQZ01001596
291576
Bacillota
CCC
Gly
>WENV182750802
OJQZ01005173
480324
Bacillota
TTG
Gln
>WENV182750059
OJQZ01000068
480324
Bacillota
TTG
Gln
>WENV182750773
OJQZ01004165
303718
Bacillota
TGT
Thr
>WENV182750867
OJQZ01007320
323864
Bacillota
TGC
Ala
>WENV182751033
OJQZ01024115
398857
Bacillota
TTC
Glu
>WENV182750212
OJQZ01000264
280444
Bacillota
GGT
Thr
>WENV182750211
OJQZ01000264
280444
Bacillota
GGT
Thr
>WENV182750115
OJQZ01000143
280444
Bacillota
GGT
Thr
>WENV182750113
OJQZ01000143
280444
Bacillota
GGT
Thr
>WENV182750735
OJQZ01003352
317482
Bacillota
TAC
Val
>WENV182750937
OJQZ01012740
483485
Bacillota
CCC
Gly
>WENV182750676
OJQZ01002550
179755
Bacillota
CCG
Arg
>WENV182750871
OJQZ01007689
46835
Bacillota
TAA
Leu
>WENV182750603
OJQZ01001824
46835
Bacillota
TAA
Leu
>WENV182750593
OJQZ01001744
398832
Bacillota
TTC
Glu
>WENV182749991
OJQZ01000025
321248
Bacillota
TAC
Val
>WENV182750167
OJQZ01000211
321248
Bacillota
TAC
Val
>WENV182750950
OJQZ01013470
175857
Bacillota
GTG
His
>WENV182750701
OJQZ01002894
285756
Bacillota
GCC
Gly
>WENV182750415
OJQZ01000828
285756
Bacillota
GCC
Gly
>WENV182750145
OJQZ01000183
285756
Bacillota
GCC
Gly
>WENV182750539
OJQZ01001384
398833
Bacillota
TGT
Thr
>WENV182750279
OJQZ01000389
398833
Bacillota
TGT
Thr
>WENV182750210
OJQZ01000264
175849
Bacillota
GTC
Asp
>WENV182750114
OJQZ01000143
175849
Bacillota
GTC
Asp
>WENV182751005
OJQZ01019704
280486
Bacillota
TGC
Ala
>WENV182750993
OJQZ01019064
280486
Bacillota
TGC
Ala
>WENV182750244
OJQZ01000317
56074
Bacillota
TGA
Ser
>WENV182750233
OJQZ01000305
56074
Bacillota
TGA
Ser
>WENV182750387
OJQZ01000702
280473
Bacillota
TGG
Pro
>WENV182750369
OJQZ01000613
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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