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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182758510
OJRI01004607
179231
Actinomycetota
TAC
Val
>WENV182758881
OJRI01038644
176499
Actinomycetota
CAT
Met
>WENV182758981
OJRI01064869
175883
Actinomycetota
GAT
Ile
>WENV182758455
OJRI01003096
175907
Actinomycetota
TAC
Val
>WENV182758355
OJRI01001413
280498
Actinomycetota
GTT
Asn
>WENV182758354
OJRI01001413
295964
Actinomycetota
GTT
Asn
>WENV182758395
OJRI01001954
56083
Actinomycetota
CGA
Ser
>WENV182758321
OJRI01001150
140768
Actinomycetota
TAG
Leu
>WENV182758279
OJRI01000939
176075
Actinomycetota
TCT
Arg
>WENV182758571
OJRI01007409
175848
Actinomycetota
TGG
Pro
>WENV182758641
OJRI01010544
176078
Actinomycetota
GGG
Pro
>WENV182758684
OJRI01013367
20208
Actinomycetota
GAG
Leu
>WENV182758412
OJRI01002097
175837
Actinomycetota
ACG
Arg
>WENV182758348
OJRI01001401
29393
Actinomycetota
GCT
Ser
>WENV182758452
OJRI01003010
176077
Actinomycetota
CAT
Met
>WENV182758523
OJRI01005151
184564
Actinomycetota
CTT
Lys
>WENV182758445
OJRI01002883
280524
Actinomycetota
TGC
Ala
>WENV182758358
OJRI01001433
398948
Actinomycetota
TTC
Glu
>WENV182758557
OJRI01007072
480374
Actinomycetota
TTG
Gln
>WENV182758375
OJRI01001650
150272
Actinomycetota
TAA
Leu
>WENV182758346
OJRI01001401
117777
Actinomycetota
>WENV182758347
OJRI01001401
175949
Actinomycetota
CAT
Met
>WENV182758568
OJRI01007330
280496
Actinomycetota
CGT
Thr
>WENV182758826
OJRI01028545
280703
Actinomycetota
CCT
Arg
>WENV182758424
OJRI01002361
280450
Actinomycetota
TTT
Lys
>WENV182758588
OJRI01008111
480329
Actinomycetota
CCC
Gly
>WENV182758711
OJRI01015283
175882
Actinomycetota
TGG
Pro
>WENV182758592
OJRI01008222
99865
Actinomycetota
CAG
Leu
>WENV182758449
OJRI01002960
480319
Actinomycetota
TTG
Gln
>WENV182758844
OJRI01031805
280499
Actinomycetota
CCT
Arg
>WENV182758402
OJRI01001985
398853
Actinomycetota
CTG
Gln
>WENV182758421
OJRI01002256
175843
Actinomycetota
CAA
Leu
>WENV182758414
OJRI01002152
56075
Actinomycetota
TGA
Ser
>WENV182758861
OJRI01034925
46642
Actinomycetota
CGA
Ser
>WENV182758401
OJRI01001985
289788
Actinomycetota
CTC
Glu
>WENV182758880
OJRI01038644
117903
Actinomycetota
GTA
Tyr
>WENV182758581
OJRI01007875
56071
Actinomycetota
TGA
Ser
>WENV182758320
OJRI01001150
280470
Actinomycetota
CGT
Thr
>WENV182758280
OJRI01000940
480376
Actinomycetota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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