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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
56 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182763794
OJRP01000128
285360
Bacteroidota
TTT
Lys
>WENV182764147
OJRP01002793
285360
Bacteroidota
TTT
Lys
>WENV182763797
OJRP01000133
117741
Bacteroidota
TAG
Leu
>WENV182763716
OJRP01000037
398829
Bacteroidota
CCT
Arg
>WENV182764257
OJRP01006161
404226
Bacteroidota
CCT
Arg
>WENV182764010
OJRP01000949
175904
Bacteroidota
CGG
Pro
>WENV182763868
OJRP01000267
289031
Bacteroidota
CAT
Met
>WENV182763935
OJRP01000437
280557
Bacteroidota
CAT
Met
>WENV182764062
OJRP01001376
483416
Bacteroidota
CTG
Gln
>WENV182763747
OJRP01000066
483416
Bacteroidota
CTG
Gln
>WENV182764256
OJRP01006161
398871
Bacteroidota
TTC
Glu
>WENV182763903
OJRP01000358
398871
Bacteroidota
TTC
Glu
>WENV182763796
OJRP01000132
175906
Bacteroidota
GTG
His
>WENV182763970
OJRP01000622
175903
Bacteroidota
GTG
His
>WENV182763692
OJRP01000015
175903
Bacteroidota
GTG
His
>WENV182763748
OJRP01000067
156068
Bacteroidota
TAC
Val
>WENV182763872
OJRP01000272
118089
Bacteroidota
TAG
Leu
>WENV182764011
OJRP01000949
280530
Bacteroidota
CCA
Trp
>WENV182763961
OJRP01000544
178907
Bacteroidota
TCT
Arg
>WENV182764564
OJRP01041038
182267
Bacteroidota
GTT
Asn
>WENV182763916
OJRP01000394
20449
Bacteroidota
GGA
Ser
>WENV182763981
OJRP01000732
21127
Bacteroidota
GGA
Ser
>WENV182764220
OJRP01004933
56072
Bacteroidota
TAA
Leu
>WENV182763957
OJRP01000518
56072
Bacteroidota
TAA
Leu
>WENV182764213
OJRP01004602
57807
Bacteroidota
TGA
Ser
>WENV182763962
OJRP01000547
57807
Bacteroidota
TGA
Ser
>WENV182763947
OJRP01000467
57807
Bacteroidota
TGA
Ser
>WENV182763929
OJRP01000414
480404
Bacteroidota
TTG
Gln
>WENV182763953
OJRP01000488
280451
Bacteroidota
CGT
Thr
>WENV182764060
OJRP01001350
99847
Bacteroidota
GTA
Tyr
>WENV182763791
OJRP01000126
399200
Bacteroidota
CAT
Met
>WENV182763768
OJRP01000091
399200
Bacteroidota
CAT
Met
>WENV182764107
OJRP01002001
186874
Bacteroidota
CAT
Met
>WENV182764078
OJRP01001636
186874
Bacteroidota
CAT
Met
>WENV182763784
OJRP01000116
215303
Bacteroidota
GTC
Asp
>WENV182763926
OJRP01000409
178179
Bacteroidota
GGC
Ala
>WENV182764229
OJRP01005166
332896
Bacteroidota
TTT
Lys
>WENV182763866
OJRP01000263
280478
Bacteroidota
GCC
Gly
>WENV182763737
OJRP01000053
280478
Bacteroidota
GCC
Gly
>WENV182763722
OJRP01000042
187400
Bacteroidota
GTT
Asn
>WENV182764124
OJRP01002489
175844
Bacteroidota
GGC
Ala
>WENV182763674
OJRP01000007
73011
Bacteroidota
CAA
Leu
>WENV182764337
OJRP01009151
183889
Bacteroidota
GGC
Ala
>WENV182764019
OJRP01000985
480318
Bacteroidota
CTG
Gln
>WENV182763876
OJRP01000287
398828
Bacteroidota
CCG
Arg
>WENV182763870
OJRP01000270
74084
Bacteroidota
CAG
Leu
>WENV182763738
OJRP01000053
74084
Bacteroidota
CAG
Leu
>WENV182763785
OJRP01000116
176192
Bacteroidota
TCT
Arg
>WENV182764117
OJRP01002387
484496
Bacteroidota
TTG
Gln
>WENV182763976
OJRP01000663
484496
Bacteroidota
TTG
Gln
>WENV182763867
OJRP01000266
484496
Bacteroidota
TTG
Gln
>WENV182763689
OJRP01000011
484496
Bacteroidota
TTG
Gln
>WENV182763815
OJRP01000175
285750
Bacteroidota
CCC
Gly
>WENV182764432
OJRP01016342
188555
Bacteroidota
CAT
Met
>WENV182763690
OJRP01000012
117804
Bacteroidota
TAG
Leu
>WENV182764162
OJRP01003287
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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