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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182765142
OJRQ01003923
280500
Bacillota
TGC
Ala
>WENV182764866
OJRQ01000189
179917
Bacillota
CAT
Met
>WENV182765100
OJRQ01001648
73664
Bacillota
CAG
Leu
>WENV182764863
OJRQ01000189
284723
Bacillota
TAC
Val
>WENV182764970
OJRQ01000393
284723
Bacillota
TAC
Val
>WENV182765165
OJRQ01005529
175847
Bacillota
GTC
Asp
>WENV182765083
OJRQ01001396
179810
Bacillota
TCT
Arg
>WENV182764788
OJRQ01000096
179810
Bacillota
TCT
Arg
>WENV182765101
OJRQ01001654
294020
Bacillota
TAC
Val
>WENV182765243
OJRQ01017314
46655
Bacillota
TGA
Ser
>WENV182765152
OJRQ01004261
292374
Bacillota
TGC
Ala
>WENV182765115
OJRQ01002150
186051
Bacillota
GAT
Ile
>WENV182765179
OJRQ01007141
291597
Bacillota
TGC
Ala
>WENV182765234
OJRQ01016126
118669
Bacillota
GTA
Tyr
>WENV182764969
OJRQ01000393
175915
Bacillota
GTC
Asp
>WENV182765084
OJRQ01001396
175857
Bacillota
GTG
His
>WENV182765086
OJRQ01001396
280463
Bacillota
TTT
Lys
>WENV182765173
OJRQ01006029
280486
Bacillota
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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