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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
48 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182769682
OJRW01005347
179231
Actinomycetota
TAC
Val
>WENV182770060
OJRW01029819
176499
Actinomycetota
CAT
Met
>WENV182770132
OJRW01043357
175907
Actinomycetota
TAC
Val
>WENV182769209
OJRW01000830
147806
Actinomycetota
TAA
Leu
>WENV182769412
OJRW01002065
280498
Actinomycetota
GTT
Asn
>WENV182769612
OJRW01004128
280498
Actinomycetota
GTT
Asn
>WENV182769952
OJRW01015892
459899
Actinomycetota
TTC
Glu
>WENV182770057
OJRW01028861
56083
Actinomycetota
CGA
Ser
>WENV182769445
OJRW01002343
140768
Actinomycetota
TAG
Leu
>WENV182770113
OJRW01039611
176075
Actinomycetota
TCT
Arg
>WENV182770019
OJRW01023542
175848
Actinomycetota
TGG
Pro
>WENV182769426
OJRW01002151
175837
Actinomycetota
ACG
Arg
>WENV182769963
OJRW01017417
280441
Actinomycetota
CCG
Arg
>WENV182770188
OJRW01058843
280702
Actinomycetota
GGC
Ala
>WENV182769953
OJRW01015918
176077
Actinomycetota
CAT
Met
>WENV182770033
OJRW01025537
241064
Actinomycetota
CTC
Glu
>WENV182769815
OJRW01008829
176638
Actinomycetota
GGG
Pro
>WENV182769937
OJRW01014984
176723
Actinomycetota
TCT
Arg
>WENV182770195
OJRW01063895
291585
Actinomycetota
GCC
Gly
>WENV182770206
OJRW01069245
150272
Actinomycetota
TAA
Leu
>WENV182769719
OJRW01006122
280523
Actinomycetota
GGC
Ala
>WENV182769482
OJRW01002602
176555
Actinomycetota
CAT
Met
>WENV182769609
OJRW01004111
175841
Actinomycetota
TAT
Ile
>WENV182770150
OJRW01047852
280496
Actinomycetota
CGT
Thr
>WENV182769667
OJRW01004973
20205
Actinomycetota
GCT
Ser
>WENV182770194
OJRW01063307
175926
Actinomycetota
CAT
Met
>WENV182769489
OJRW01002665
280450
Actinomycetota
TTT
Lys
>WENV182769410
OJRW01002036
280450
Actinomycetota
TTT
Lys
>WENV182769319
OJRW01001434
56166
Actinomycetota
TGA
Ser
>WENV182769818
OJRW01009023
358727
Actinomycetota
CCG
Arg
>WENV182769479
OJRW01002544
480329
Actinomycetota
CCC
Gly
>WENV182770032
OJRW01025537
483206
Actinomycetota
CTG
Gln
>WENV182769053
OJRW01000290
175882
Actinomycetota
TGG
Pro
>WENV182769831
OJRW01009402
20209
Actinomycetota
GAG
Leu
>WENV182769783
OJRW01008039
480319
Actinomycetota
TTG
Gln
>WENV182769422
OJRW01002135
280489
Actinomycetota
CTC
Glu
>WENV182769770
OJRW01007670
280499
Actinomycetota
CCT
Arg
>WENV182769392
OJRW01001923
280499
Actinomycetota
CCT
Arg
>WENV182769423
OJRW01002135
398853
Actinomycetota
CTG
Gln
>WENV182769746
OJRW01006901
175843
Actinomycetota
CAA
Leu
>WENV182769733
OJRW01006684
203883
Actinomycetota
TCT
Arg
>WENV182769669
OJRW01005030
46642
Actinomycetota
CGA
Ser
>WENV182769586
OJRW01003761
104211
Actinomycetota
CAG
Leu
>WENV182769561
OJRW01003568
104211
Actinomycetota
CAG
Leu
>WENV182770059
OJRW01029819
117903
Actinomycetota
GTA
Tyr
>WENV182769677
OJRW01005218
147796
Actinomycetota
TAA
Leu
>WENV182769444
OJRW01002343
280470
Actinomycetota
CGT
Thr
>WENV182769966
OJRW01017528
176640
Actinomycetota
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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