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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
44 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182773971
OJRZ01009892
179231
Actinomycetota
TAC
Val
>WENV182774054
OJRZ01014720
176499
Actinomycetota
CAT
Met
>WENV182774060
OJRZ01015126
175907
Actinomycetota
TAC
Val
>WENV182774100
OJRZ01019828
285746
Actinomycetota
GGC
Ala
>WENV182774005
OJRZ01011937
56083
Actinomycetota
CGA
Ser
>WENV182773769
OJRZ01003510
140768
Actinomycetota
TAG
Leu
>WENV182774194
OJRZ01035507
176075
Actinomycetota
TCT
Arg
>WENV182774080
OJRZ01017729
175848
Actinomycetota
TGG
Pro
>WENV182773906
OJRZ01006539
175837
Actinomycetota
ACG
Arg
>WENV182773900
OJRZ01006276
280441
Actinomycetota
CCG
Arg
>WENV182774133
OJRZ01022541
280702
Actinomycetota
GGC
Ala
>WENV182774264
OJRZ01058341
398843
Actinomycetota
GTT
Asn
>WENV182773950
OJRZ01008537
176638
Actinomycetota
GGG
Pro
>WENV182773946
OJRZ01008304
280524
Actinomycetota
TGC
Ala
>WENV182774114
OJRZ01021205
291585
Actinomycetota
GCC
Gly
>WENV182774120
OJRZ01021480
280523
Actinomycetota
GGC
Ala
>WENV182774023
OJRZ01013245
175949
Actinomycetota
CAT
Met
>WENV182773928
OJRZ01007774
176555
Actinomycetota
CAT
Met
>WENV182774233
OJRZ01044612
175841
Actinomycetota
TAT
Ile
>WENV182774241
OJRZ01046327
280544
Actinomycetota
GTG
His
>WENV182773650
OJRZ01002204
175872
Actinomycetota
GTC
Asp
>WENV182773983
OJRZ01010643
280703
Actinomycetota
CCT
Arg
>WENV182773804
OJRZ01004144
20205
Actinomycetota
GCT
Ser
>WENV182774225
OJRZ01042614
175926
Actinomycetota
CAT
Met
>WENV182773978
OJRZ01010403
280450
Actinomycetota
TTT
Lys
>WENV182773937
OJRZ01007903
480329
Actinomycetota
CCC
Gly
>WENV182773603
OJRZ01001708
175882
Actinomycetota
TGG
Pro
>WENV182773838
OJRZ01004789
20209
Actinomycetota
GAG
Leu
>WENV182774057
OJRZ01014954
99865
Actinomycetota
CAG
Leu
>WENV182773852
OJRZ01005063
480319
Actinomycetota
TTG
Gln
>WENV182773877
OJRZ01005548
280489
Actinomycetota
CTC
Glu
>WENV182774077
OJRZ01017437
280499
Actinomycetota
CCT
Arg
>WENV182773872
OJRZ01005441
280499
Actinomycetota
CCT
Arg
>WENV182773878
OJRZ01005548
398853
Actinomycetota
CTG
Gln
>WENV182774145
OJRZ01024620
176642
Actinomycetota
CAA
Leu
>WENV182773994
OJRZ01011258
175843
Actinomycetota
CAA
Leu
>WENV182773723
OJRZ01002910
56075
Actinomycetota
TGA
Ser
>WENV182773981
OJRZ01010587
46642
Actinomycetota
CGA
Ser
>WENV182774053
OJRZ01014720
117903
Actinomycetota
GTA
Tyr
>WENV182774063
OJRZ01015545
56071
Actinomycetota
TGA
Ser
>WENV182773939
OJRZ01008084
147796
Actinomycetota
TAA
Leu
>WENV182773768
OJRZ01003510
280470
Actinomycetota
CGT
Thr
>WENV182773961
OJRZ01009512
480376
Actinomycetota
CCC
Gly
>WENV182774143
OJRZ01024246
176640
Actinomycetota
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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