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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
30 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182783034
OJSF01007657
175907
Actinomycetota
TAC
Val
>WENV182783073
OJSF01010176
280498
Actinomycetota
GTT
Asn
>WENV182783038
OJSF01008155
56083
Actinomycetota
CGA
Ser
>WENV182782939
OJSF01004093
140768
Actinomycetota
TAG
Leu
>WENV182783203
OJSF01024975
176075
Actinomycetota
TCT
Arg
>WENV182783063
OJSF01009645
175848
Actinomycetota
TGG
Pro
>WENV182783054
OJSF01009107
176078
Actinomycetota
GGG
Pro
>WENV182783109
OJSF01012433
175837
Actinomycetota
ACG
Arg
>WENV182782946
OJSF01004261
29393
Actinomycetota
GCT
Ser
>WENV182783186
OJSF01020345
280549
Actinomycetota
CAC
Val
>WENV182783089
OJSF01010502
349164
Actinomycetota
CTC
Glu
>WENV182783185
OJSF01020345
434162
Actinomycetota
GAC
Val
>WENV182782909
OJSF01003600
176077
Actinomycetota
CAT
Met
>WENV182783261
OJSF01036585
241064
Actinomycetota
CTC
Glu
>WENV182783158
OJSF01017714
280524
Actinomycetota
TGC
Ala
>WENV182783131
OJSF01013750
150272
Actinomycetota
TAA
Leu
>WENV182782986
OJSF01005368
117777
Actinomycetota
>WENV182782885
OJSF01003068
191955
Actinomycetota
TGT
Thr
>WENV182783091
OJSF01010504
280544
Actinomycetota
GTG
His
>WENV182783021
OJSF01006626
280496
Actinomycetota
CGT
Thr
>WENV182782938
OJSF01004093
323758
Actinomycetota
CGT
Thr
>WENV182782899
OJSF01003327
358727
Actinomycetota
CCG
Arg
>WENV182783260
OJSF01036585
483206
Actinomycetota
CTG
Gln
>WENV182783011
OJSF01006248
99865
Actinomycetota
CAG
Leu
>WENV182782882
OJSF01003041
222475
Actinomycetota
CTT
Lys
>WENV182783090
OJSF01010502
398853
Actinomycetota
CTG
Gln
>WENV182783104
OJSF01012169
175843
Actinomycetota
CAA
Leu
>WENV182783157
OJSF01017714
179238
Actinomycetota
GAT
Ile
>WENV182783055
OJSF01009182
506175
Actinomycetota
TTG
Gln
>WENV182782860
OJSF01002835
480376
Actinomycetota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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