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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182784228
OJSG01033622
280503
Actinomycetota
CCT
Arg
>WENV182783989
OJSG01005244
56083
Actinomycetota
CGA
Ser
>WENV182784161
OJSG01021853
140768
Actinomycetota
TAG
Leu
>WENV182784244
OJSG01038831
176075
Actinomycetota
TCT
Arg
>WENV182784035
OJSG01007920
175848
Actinomycetota
TGG
Pro
>WENV182783990
OJSG01005292
59689
Actinomycetota
GGA
Ser
>WENV182784040
OJSG01008800
175837
Actinomycetota
ACG
Arg
>WENV182784065
OJSG01010193
280549
Actinomycetota
CAC
Val
>WENV182783993
OJSG01005588
349164
Actinomycetota
CTC
Glu
>WENV182784039
OJSG01008460
280441
Actinomycetota
CCG
Arg
>WENV182784064
OJSG01010193
434162
Actinomycetota
GAC
Val
>WENV182784214
OJSG01029995
21508
Actinomycetota
GAG
Leu
>WENV182784104
OJSG01014201
398948
Actinomycetota
TTC
Glu
>WENV182784067
OJSG01010468
150272
Actinomycetota
TAA
Leu
>WENV182784136
OJSG01016782
280544
Actinomycetota
GTG
His
>WENV182784160
OJSG01021853
323758
Actinomycetota
CGT
Thr
>WENV182784229
OJSG01034081
222475
Actinomycetota
CTT
Lys
>WENV182783994
OJSG01005588
398853
Actinomycetota
CTG
Gln
>WENV182784058
OJSG01009757
175843
Actinomycetota
CAA
Leu
>WENV182784147
OJSG01019016
56075
Actinomycetota
TGA
Ser
>WENV182784071
OJSG01011057
104211
Actinomycetota
CAG
Leu
>WENV182784260
OJSG01044085
506175
Actinomycetota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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