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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
26 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182792862
OJSO01013373
179231
Actinomycetota
TAC
Val
>WENV182792672
OJSO01004132
176499
Actinomycetota
CAT
Met
>WENV182793053
OJSO01047307
147806
Actinomycetota
TAA
Leu
>WENV182792760
OJSO01007231
459899
Actinomycetota
TTC
Glu
>WENV182793023
OJSO01038153
140768
Actinomycetota
TAG
Leu
>WENV182792921
OJSO01021757
176075
Actinomycetota
TCT
Arg
>WENV182793027
OJSO01038515
175837
Actinomycetota
ACG
Arg
>WENV182792910
OJSO01019101
280441
Actinomycetota
CCG
Arg
>WENV182793056
OJSO01048813
280523
Actinomycetota
GGC
Ala
>WENV182793002
OJSO01035400
176555
Actinomycetota
CAT
Met
>WENV182792759
OJSO01007217
175841
Actinomycetota
TAT
Ile
>WENV182792761
OJSO01007231
175872
Actinomycetota
GTC
Asp
>WENV182792688
OJSO01004705
20205
Actinomycetota
GCT
Ser
>WENV182792476
OJSO01001449
480329
Actinomycetota
CCC
Gly
>WENV182792956
OJSO01025067
20209
Actinomycetota
GAG
Leu
>WENV182792881
OJSO01015340
222475
Actinomycetota
CTT
Lys
>WENV182793028
OJSO01038634
480319
Actinomycetota
TTG
Gln
>WENV182792746
OJSO01006695
280489
Actinomycetota
CTC
Glu
>WENV182793045
OJSO01043934
280499
Actinomycetota
CCT
Arg
>WENV182792747
OJSO01006695
398853
Actinomycetota
CTG
Gln
>WENV182792830
OJSO01011402
176642
Actinomycetota
CAA
Leu
>WENV182792647
OJSO01003684
203883
Actinomycetota
TCT
Arg
>WENV182792893
OJSO01017593
104211
Actinomycetota
CAG
Leu
>WENV182792671
OJSO01004132
117903
Actinomycetota
GTA
Tyr
>WENV182793024
OJSO01038228
56071
Actinomycetota
TGA
Ser
>WENV182793022
OJSO01038153
280470
Actinomycetota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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