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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
52 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182794363
OJSP01007941
179231
Actinomycetota
TAC
Val
>WENV182794858
OJSP01062131
175883
Actinomycetota
GAT
Ile
>WENV182794642
OJSP01023078
175907
Actinomycetota
TAC
Val
>WENV182794666
OJSP01025020
147806
Actinomycetota
TAA
Leu
>WENV182794338
OJSP01007506
280498
Actinomycetota
GTT
Asn
>WENV182794339
OJSP01007506
280498
Actinomycetota
GTT
Asn
>WENV182794924
OJSP01086597
295964
Actinomycetota
GTT
Asn
>WENV182793838
OJSP01001738
140768
Actinomycetota
TAG
Leu
>WENV182794539
OJSP01015831
176075
Actinomycetota
TCT
Arg
>WENV182794780
OJSP01042717
152047
Actinomycetota
ACG
Arg
>WENV182793795
OJSP01001464
59689
Actinomycetota
GGA
Ser
>WENV182794095
OJSP01003569
175837
Actinomycetota
ACG
Arg
>WENV182794820
OJSP01050840
56383
Actinomycetota
CGA
Ser
>WENV182794877
OJSP01067149
280702
Actinomycetota
GGC
Ala
>WENV182794356
OJSP01007814
398843
Actinomycetota
GTT
Asn
>WENV182794355
OJSP01007738
283312
Actinomycetota
GTG
His
>WENV182793955
OJSP01002417
176638
Actinomycetota
GGG
Pro
>WENV182794014
OJSP01002956
280524
Actinomycetota
TGC
Ala
>WENV182794323
OJSP01007218
283313
Actinomycetota
CCG
Arg
>WENV182793909
OJSP01002115
398948
Actinomycetota
TTC
Glu
>WENV182794452
OJSP01012210
176723
Actinomycetota
TCT
Arg
>WENV182794792
OJSP01044839
117777
Actinomycetota
>WENV182794426
OJSP01011004
280523
Actinomycetota
GGC
Ala
>WENV182794685
OJSP01026967
191955
Actinomycetota
TGT
Thr
>WENV182793806
OJSP01001560
175841
Actinomycetota
TAT
Ile
>WENV182794628
OJSP01021943
20415
Actinomycetota
GAG
Leu
>WENV182794884
OJSP01069895
280536
Actinomycetota
CTT
Lys
>WENV182793908
OJSP01002115
175872
Actinomycetota
GTC
Asp
>WENV182794592
OJSP01018537
140879
Actinomycetota
TAG
Leu
>WENV182793859
OJSP01001825
20205
Actinomycetota
GCT
Ser
>WENV182794371
OJSP01008368
178569
Actinomycetota
CAT
Met
>WENV182794754
OJSP01037764
280450
Actinomycetota
TTT
Lys
>WENV182794129
OJSP01003876
280450
Actinomycetota
TTT
Lys
>WENV182793854
OJSP01001805
280450
Actinomycetota
TTT
Lys
>WENV182794557
OJSP01016449
480329
Actinomycetota
CCC
Gly
>WENV182794878
OJSP01067673
483206
Actinomycetota
CTG
Gln
>WENV182793571
OJSP01000638
175882
Actinomycetota
TGG
Pro
>WENV182794398
OJSP01009543
20209
Actinomycetota
GAG
Leu
>WENV182794281
OJSP01006291
99865
Actinomycetota
CAG
Leu
>WENV182794100
OJSP01003622
480319
Actinomycetota
TTG
Gln
>WENV182794137
OJSP01003928
280489
Actinomycetota
CTC
Glu
>WENV182794308
OJSP01006832
280499
Actinomycetota
CCT
Arg
>WENV182794138
OJSP01003928
398853
Actinomycetota
CTG
Gln
>WENV182794770
OJSP01041147
176642
Actinomycetota
CAA
Leu
>WENV182794069
OJSP01003338
175843
Actinomycetota
CAA
Leu
>WENV182794502
OJSP01014160
203883
Actinomycetota
TCT
Arg
>WENV182794291
OJSP01006499
46642
Actinomycetota
CGA
Ser
>WENV182793873
OJSP01001892
104211
Actinomycetota
CAG
Leu
>WENV182794091
OJSP01003534
117903
Actinomycetota
GTA
Tyr
>WENV182793729
OJSP01001215
147796
Actinomycetota
TAA
Leu
>WENV182793837
OJSP01001738
280470
Actinomycetota
CGT
Thr
>WENV182794702
OJSP01029809
176640
Actinomycetota
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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