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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182796903
OJSS01000065
283336
Actinomycetota
GGT
Thr
>WENV182796955
OJSS01000514
178802
Actinomycetota
TAA
Leu
>WENV182796902
OJSS01000065
118279
Actinomycetota
GTA
Tyr
>WENV182796961
OJSS01000662
178581
Actinomycetota
TAC
Val
>WENV182796940
OJSS01000302
100162
Actinomycetota
TGA
Ser
>WENV182796944
OJSS01000327
283331
Actinomycetota
CTC
Glu
>WENV182796904
OJSS01000065
399203
Actinomycetota
CAT
Met
>WENV182796979
OJSS01001128
283323
Actinomycetota
TGT
Thr
>WENV182796953
OJSS01000494
178580
Actinomycetota
GAA
Phe
>WENV182796952
OJSS01000494
178579
Actinomycetota
GTC
Asp
>WENV182796946
OJSS01000411
283329
Actinomycetota
GTG
His
>WENV182796958
OJSS01000585
283327
Actinomycetota
TGC
Ala
>WENV182796981
OJSS01001217
283335
Actinomycetota
CTT
Lys
>WENV182796898
OJSS01000042
100161
Actinomycetota
CAG
Leu
>WENV182796906
OJSS01000070
56387
Actinomycetota
CGA
Ser
>WENV182796951
OJSS01000472
178582
Actinomycetota
TTT
Lys
>WENV182796943
OJSS01000327
400420
Actinomycetota
CTG
Gln
>WENV182796949
OJSS01000425
283322
Actinomycetota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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