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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
32 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182799802
OJTW01000718
184537
Bacillota
ACG
Arg
>WENV182799843
OJTW01002091
29462
Bacillota
GGA
Ser
>WENV182799724
OJTW01000079
408526
Bacillota
GCA
Cys
>WENV182799792
OJTW01000513
296855
Bacillota
GGT
Thr
>WENV182799767
OJTW01000252
48505
Bacillota
TGA
Ser
>WENV182799784
OJTW01000367
289717
Bacillota
CTT
Lys
>WENV182799756
OJTW01000187
180920
Bacillota
CAT
Met
>WENV182799846
OJTW01002295
20932
Bacillota
GCT
Ser
>WENV182799773
OJTW01000304
291553
Bacillota
GAA
Phe
>WENV182799749
OJTW01000156
482593
Bacillota
CCC
Gly
>WENV182799859
OJTW01003265
339995
Bacillota
TGC
Ala
>WENV182799800
OJTW01000684
20942
Bacillota
GGA
Ser
>WENV182799832
OJTW01001354
371336
Bacillota
GAA
Phe
>WENV182799836
OJTW01001363
415856
Bacillota
CCT
Arg
>WENV182799793
OJTW01000513
184495
Bacillota
CAT
Met
>WENV182799730
OJTW01000093
141202
Bacillota
CAA
Leu
>WENV182799789
OJTW01000513
289713
Bacillota
TGT
Thr
>WENV182799782
OJTW01000365
404091
Bacillota
TTG
Gln
>WENV182799852
OJTW01002998
497761
Bacillota
TCC
Gly
>WENV182799781
OJTW01000365
289716
Bacillota
GTG
His
>WENV182799777
OJTW01000341
432453
Bacillota
TTC
Glu
>WENV182799806
OJTW01000893
480337
Bacillota
TCC
Gly
>WENV182799804
OJTW01000802
119459
Bacillota
TAG
Leu
>WENV182799776
OJTW01000341
333281
Bacillota
GTT
Asn
>WENV182799837
OJTW01001408
280547
Bacillota
GTC
Asp
>WENV182799783
OJTW01000365
289761
Bacillota
TTT
Lys
>WENV182799853
OJTW01002998
203851
Bacillota
TCT
Arg
>WENV182799849
OJTW01002998
203851
Bacillota
TCT
Arg
>WENV182799778
OJTW01000341
289715
Bacillota
TAC
Val
>WENV182799794
OJTW01000517
20943
Bacillota
CGA
Ser
>WENV182799805
OJTW01000893
208539
Bacillota
TGG
Pro
>WENV182799807
OJTW01000893
184539
Bacillota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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