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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
40 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182814292
OJYH01003296
178066
Bacillota
CAT
Met
>WENV182814252
OJYH01000271
184537
Bacillota
ACG
Arg
>WENV182814198
OJYH01000062
408526
Bacillota
GCA
Cys
>WENV182814261
OJYH01000478
400111
Bacillota
GTT
Asn
>WENV182814218
OJYH01000079
296855
Bacillota
GGT
Thr
>WENV182814257
OJYH01000352
48505
Bacillota
TGA
Ser
>WENV182814242
OJYH01000191
289717
Bacillota
CTT
Lys
>WENV182814287
OJYH01002863
20360
Bacillota
TGA
Ser
>WENV182814284
OJYH01002469
282752
Bacillota
TTT
Lys
>WENV182814262
OJYH01000496
20932
Bacillota
GCT
Ser
>WENV182814196
OJYH01000062
291553
Bacillota
GAA
Phe
>WENV182814227
OJYH01000106
482593
Bacillota
CCC
Gly
>WENV182814277
OJYH01001897
339995
Bacillota
TGC
Ala
>WENV182814226
OJYH01000103
20942
Bacillota
GGA
Ser
>WENV182814279
OJYH01002469
400112
Bacillota
GCC
Gly
>WENV182814219
OJYH01000079
184495
Bacillota
CAT
Met
>WENV182814220
OJYH01000086
141202
Bacillota
CAA
Leu
>WENV182814293
OJYH01003296
46663
Bacillota
TAA
Leu
>WENV182814273
OJYH01001726
29614
Bacillota
GGA
Ser
>WENV182814280
OJYH01002469
480905
Bacillota
TCC
Gly
>WENV182814215
OJYH01000079
289713
Bacillota
TGT
Thr
>WENV182814254
OJYH01000299
404091
Bacillota
TTG
Gln
>WENV182814253
OJYH01000299
289716
Bacillota
GTG
His
>WENV182814268
OJYH01000733
100097
Bacillota
GTA
Tyr
>WENV182814288
OJYH01002863
20361
Bacillota
GCT
Ser
>WENV182814259
OJYH01000463
432453
Bacillota
TTC
Glu
>WENV182814246
OJYH01000216
480337
Bacillota
TCC
Gly
>WENV182814256
OJYH01000334
119459
Bacillota
TAG
Leu
>WENV182814282
OJYH01002469
282757
Bacillota
GTG
His
>WENV182814195
OJYH01000062
280547
Bacillota
GTC
Asp
>WENV182814197
OJYH01000062
445407
Bacillota
GCC
Gly
>WENV182814255
OJYH01000299
289761
Bacillota
TTT
Lys
>WENV182814281
OJYH01002469
176771
Bacillota
TCT
Arg
>WENV182814267
OJYH01000733
282754
Bacillota
TGT
Thr
>WENV182814161
OJYH01000041
320075
Bacillota
GAA
Phe
>WENV182814260
OJYH01000463
289715
Bacillota
TAC
Val
>WENV182814264
OJYH01000585
20943
Bacillota
CGA
Ser
>WENV182814245
OJYH01000216
208539
Bacillota
TGG
Pro
>WENV182814247
OJYH01000216
184539
Bacillota
TCT
Arg
>WENV182814283
OJYH01002469
400113
Bacillota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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