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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
68 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182817922
OJZM01005402
200563
Bacillota
TGG
Pro
>WENV182817924
OJZM01005402
200563
Bacillota
TGG
Pro
>WENV182817933
OJZM01006242
178066
Bacillota
CAT
Met
>WENV182817588
OJZM01000098
178427
Bacillota
CAT
Met
>WENV182817479
OJZM01000018
184537
Bacillota
ACG
Arg
>WENV182817875
OJZM01000892
20221
Bacillota
>WENV182817581
OJZM01000091
408526
Bacillota
GCA
Cys
>WENV182817901
OJZM01001349
400111
Bacillota
GTT
Asn
>WENV182817787
OJZM01000539
296855
Bacillota
GGT
Thr
>WENV182817923
OJZM01005402
280644
Bacillota
CCA
Trp
>WENV182817724
OJZM01000343
48505
Bacillota
TGA
Ser
>WENV182817482
OJZM01000018
289717
Bacillota
CTT
Lys
>WENV182817748
OJZM01000429
464153
Bacillota
TTC
Glu
>WENV182817754
OJZM01000429
464153
Bacillota
TTC
Glu
>WENV182817937
OJZM01006813
20360
Bacillota
TGA
Ser
>WENV182817847
OJZM01000742
282752
Bacillota
TTT
Lys
>WENV182817640
OJZM01000169
20932
Bacillota
GCT
Ser
>WENV182817579
OJZM01000091
291553
Bacillota
GAA
Phe
>WENV182817909
OJZM01002322
13228
Bacillota
GGA
Ser
>WENV182817718
OJZM01000305
482593
Bacillota
CCC
Gly
>WENV182817929
OJZM01005786
339995
Bacillota
TGC
Ala
>WENV182817829
OJZM01000715
20942
Bacillota
GGA
Ser
>WENV182817891
OJZM01001178
480360
Bacillota
GCA
Cys
>WENV182817892
OJZM01001178
176087
Bacillota
ACG
Arg
>WENV182817894
OJZM01001285
56095
Bacillota
CAA
Leu
>WENV182817751
OJZM01000429
371336
Bacillota
GAA
Phe
>WENV182817842
OJZM01000742
400112
Bacillota
GCC
Gly
>WENV182817849
OJZM01000742
400112
Bacillota
GCC
Gly
>WENV182817788
OJZM01000539
184495
Bacillota
CAT
Met
>WENV182817917
OJZM01003221
141202
Bacillota
CAA
Leu
>WENV182817854
OJZM01000788
141202
Bacillota
CAA
Leu
>WENV182817934
OJZM01006242
46663
Bacillota
TAA
Leu
>WENV182817935
OJZM01006436
29614
Bacillota
GGA
Ser
>WENV182817850
OJZM01000742
480905
Bacillota
TCC
Gly
>WENV182817843
OJZM01000742
480905
Bacillota
TCC
Gly
>WENV182817851
OJZM01000742
282756
Bacillota
CTT
Lys
>WENV182817784
OJZM01000539
289713
Bacillota
TGT
Thr
>WENV182817893
OJZM01001178
280640
Bacillota
TAC
Val
>WENV182817826
OJZM01000686
404091
Bacillota
TTG
Gln
>WENV182817825
OJZM01000686
289716
Bacillota
GTG
His
>WENV182817931
OJZM01006242
52257
Bacillota
TAA
Leu
>WENV182817938
OJZM01006813
20361
Bacillota
GCT
Ser
>WENV182817839
OJZM01000738
432453
Bacillota
TTC
Glu
>WENV182817835
OJZM01000738
432453
Bacillota
TTC
Glu
>WENV182817734
OJZM01000381
480337
Bacillota
TCC
Gly
>WENV182817876
OJZM01001002
144655
Bacillota
TAG
Leu
>WENV182817889
OJZM01001178
176019
Bacillota
GTG
His
>WENV182817480
OJZM01000018
119459
Bacillota
TAG
Leu
>WENV182817838
OJZM01000738
333281
Bacillota
GTT
Asn
>WENV182817833
OJZM01000738
333281
Bacillota
GTT
Asn
>WENV182817845
OJZM01000742
282757
Bacillota
GTG
His
>WENV182817578
OJZM01000091
280547
Bacillota
GTC
Asp
>WENV182817837
OJZM01000738
445407
Bacillota
GCC
Gly
>WENV182817580
OJZM01000091
445407
Bacillota
GCC
Gly
>WENV182817834
OJZM01000738
289761
Bacillota
TTT
Lys
>WENV182817844
OJZM01000742
176771
Bacillota
TCT
Arg
>WENV182817919
OJZM01004831
178065
Bacillota
ACG
Arg
>WENV182817920
OJZM01004959
282755
Bacillota
GGT
Thr
>WENV182817840
OJZM01000738
289715
Bacillota
TAC
Val
>WENV182817836
OJZM01000738
289715
Bacillota
TAC
Val
>WENV182817722
OJZM01000324
20943
Bacillota
CGA
Ser
>WENV182817900
OJZM01001332
1287
Bacillota
>WENV182817733
OJZM01000381
208539
Bacillota
TGG
Pro
>WENV182817735
OJZM01000381
184539
Bacillota
TCT
Arg
>WENV182817846
OJZM01000742
400113
Bacillota
TTG
Gln
>WENV182817925
OJZM01005402
176017
Bacillota
GAT
Ile
>WENV182817895
OJZM01001296
282751
Bacillota
TGC
Ala
>WENV182817898
OJZM01001296
282751
Bacillota
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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