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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
30 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182830382
OKDY01000128
178066
Bacillota
CAT
Met
>WENV182830378
OKDY01000074
400111
Bacillota
GTT
Asn
>WENV182830384
OKDY01000129
20360
Bacillota
TGA
Ser
>WENV182830386
OKDY01000129
20360
Bacillota
TGA
Ser
>WENV182830352
OKDY01000001
180920
Bacillota
CAT
Met
>WENV182830396
OKDY01000294
282752
Bacillota
TTT
Lys
>WENV182830372
OKDY01000046
144756
Bacillota
GTA
Tyr
>WENV182830364
OKDY01000040
144756
Bacillota
GTA
Tyr
>WENV182830412
OKDY01001671
399266
Bacillota
>WENV182830398
OKDY01000294
400112
Bacillota
GCC
Gly
>WENV182830383
OKDY01000128
46663
Bacillota
TAA
Leu
>WENV182830401
OKDY01000346
29614
Bacillota
GGA
Ser
>WENV182830392
OKDY01000294
480905
Bacillota
TCC
Gly
>WENV182830399
OKDY01000294
480905
Bacillota
TCC
Gly
>WENV182830379
OKDY01000085
282756
Bacillota
CTT
Lys
>WENV182830380
OKDY01000111
100098
Bacillota
GAG
Leu
>WENV182830400
OKDY01000294
178067
Bacillota
TCG
Arg
>WENV182830402
OKDY01000366
73395
Bacillota
CAA
Leu
>WENV182830366
OKDY01000042
52257
Bacillota
TAA
Leu
>WENV182830385
OKDY01000129
20361
Bacillota
GCT
Ser
>WENV182830394
OKDY01000294
282757
Bacillota
GTG
His
>WENV182830393
OKDY01000294
176771
Bacillota
TCT
Arg
>WENV182830388
OKDY01000187
178065
Bacillota
ACG
Arg
>WENV182830416
OKDY01002018
320075
Bacillota
GAA
Phe
>WENV182830358
OKDY01000015
282755
Bacillota
GGT
Thr
>WENV182830395
OKDY01000294
400113
Bacillota
TTG
Gln
>WENV182830389
OKDY01000195
400110
Bacillota
CCT
Arg
>WENV182830390
OKDY01000202
318172
Bacillota
CCA
Trp
>WENV182830391
OKDY01000294
328987
Bacillota
TGG
Pro
>WENV182830404
OKDY01000382
282751
Bacillota
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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