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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182833239
OKER01005007
280500
Bacillota
TGC
Ala
>WENV182833176
OKER01001054
398936
Bacillota
CCT
Arg
>WENV182833121
OKER01000198
184537
Bacillota
ACG
Arg
>WENV182833154
OKER01000462
408526
Bacillota
GCA
Cys
>WENV182833145
OKER01000352
296855
Bacillota
GGT
Thr
>WENV182833108
OKER01000133
48505
Bacillota
TGA
Ser
>WENV182833194
OKER01001282
46658
Bacillota
AAG
Leu
>WENV182833150
OKER01000406
289717
Bacillota
CTT
Lys
>WENV182833230
OKER01004993
282752
Bacillota
TTT
Lys
>WENV182833172
OKER01001014
20932
Bacillota
GCT
Ser
>WENV182833158
OKER01000580
482593
Bacillota
CCC
Gly
>WENV182833215
OKER01002683
176014
Bacillota
TCT
Arg
>WENV182833109
OKER01000143
20942
Bacillota
GGA
Ser
>WENV182833251
OKER01007273
480360
Bacillota
GCA
Cys
>WENV182833231
OKER01004993
140815
Bacillota
TAG
Leu
>WENV182833232
OKER01004993
400112
Bacillota
GCC
Gly
>WENV182833146
OKER01000352
184495
Bacillota
CAT
Met
>WENV182833164
OKER01000725
141202
Bacillota
CAA
Leu
>WENV182833233
OKER01004993
480905
Bacillota
TCC
Gly
>WENV182833102
OKER01000097
293309
Bacillota
GTT
Asn
>WENV182833142
OKER01000352
289713
Bacillota
TGT
Thr
>WENV182833128
OKER01000243
404091
Bacillota
TTG
Gln
>WENV182833163
OKER01000676
398934
Bacillota
CCG
Arg
>WENV182833092
OKER01000059
401685
Bacillota
TTG
Gln
>WENV182833127
OKER01000243
289716
Bacillota
GTG
His
>WENV182833103
OKER01000097
432453
Bacillota
TTC
Glu
>WENV182833136
OKER01000308
480337
Bacillota
TCC
Gly
>WENV182833122
OKER01000198
119459
Bacillota
TAG
Leu
>WENV182833235
OKER01004993
282757
Bacillota
GTG
His
>WENV182833071
OKER01000025
280547
Bacillota
GTC
Asp
>WENV182833234
OKER01004993
176771
Bacillota
TCT
Arg
>WENV182833104
OKER01000097
289715
Bacillota
TAC
Val
>WENV182833093
OKER01000059
280476
Bacillota
TTT
Lys
>WENV182833170
OKER01001008
20943
Bacillota
CGA
Ser
>WENV182833105
OKER01000110
20943
Bacillota
CGA
Ser
>WENV182833254
OKER01007273
281196
Bacillota
CAT
Met
>WENV182833135
OKER01000308
208539
Bacillota
TGG
Pro
>WENV182833137
OKER01000308
184539
Bacillota
TCT
Arg
>WENV182833236
OKER01004993
400113
Bacillota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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