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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
40 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182835245
OKFK01001057
285360
Bacteroidota
TTT
Lys
>WENV182835221
OKFK01000254
404226
Bacteroidota
CCT
Arg
>WENV182835169
OKFK01000083
175904
Bacteroidota
CGG
Pro
>WENV182835185
OKFK01000110
280557
Bacteroidota
CAT
Met
>WENV182835222
OKFK01000254
398871
Bacteroidota
TTC
Glu
>WENV182835188
OKFK01000112
175906
Bacteroidota
GTG
His
>WENV182835148
OKFK01000049
351598
Bacteroidota
CGG
Pro
>WENV182835225
OKFK01000298
118089
Bacteroidota
TAG
Leu
>WENV182835173
OKFK01000085
398872
Bacteroidota
GGT
Thr
>WENV182835163
OKFK01000078
169545
Bacteroidota
TGG
Pro
>WENV182835170
OKFK01000083
280530
Bacteroidota
CCA
Trp
>WENV182835199
OKFK01000175
175936
Bacteroidota
CAT
Met
>WENV182835213
OKFK01000199
178907
Bacteroidota
TCT
Arg
>WENV182835176
OKFK01000090
20449
Bacteroidota
GGA
Ser
>WENV182835141
OKFK01000043
398860
Bacteroidota
CTC
Glu
>WENV182835154
OKFK01000067
480404
Bacteroidota
TTG
Gln
>WENV182835100
OKFK01000005
99847
Bacteroidota
GTA
Tyr
>WENV182835212
OKFK01000189
399200
Bacteroidota
CAT
Met
>WENV182835131
OKFK01000037
399200
Bacteroidota
CAT
Met
>WENV182835114
OKFK01000023
399026
Bacteroidota
CCT
Arg
>WENV182835151
OKFK01000050
280478
Bacteroidota
GCC
Gly
>WENV182835112
OKFK01000019
27524
Bacteroidota
GGA
Ser
>WENV182835104
OKFK01000011
280532
Bacteroidota
>WENV182835108
OKFK01000013
229246
Bacteroidota
GGC
Ala
>WENV182835156
OKFK01000069
73011
Bacteroidota
CAA
Leu
>WENV182835129
OKFK01000034
480318
Bacteroidota
CTG
Gln
>WENV182835175
OKFK01000090
74084
Bacteroidota
CAG
Leu
>WENV182835122
OKFK01000030
480325
Bacteroidota
CTG
Gln
>WENV182835094
OKFK01000001
176192
Bacteroidota
TCT
Arg
>WENV182835191
OKFK01000129
400088
Bacteroidota
GGT
Thr
>WENV182835106
OKFK01000012
69204
Bacteroidota
TGA
Ser
>WENV182835105
OKFK01000012
69204
Bacteroidota
TGA
Ser
>WENV182835216
OKFK01000233
285750
Bacteroidota
CCC
Gly
>WENV182835178
OKFK01000102
117804
Bacteroidota
TAG
Leu
>WENV182835189
OKFK01000113
365112
Bacteroidota
TTT
Lys
>WENV182835205
OKFK01000181
398836
Bacteroidota
GCA
Cys
>WENV182835107
OKFK01000012
398836
Bacteroidota
GCA
Cys
>WENV182835155
OKFK01000068
170323
Bacteroidota
GGG
Pro
>WENV182835128
OKFK01000034
170323
Bacteroidota
GGG
Pro
>WENV182835097
OKFK01000003
322836
Bacteroidota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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