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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182840830
OKHO01000061
73057
Bacteroidota
GAG
Leu
>WENV182840824
OKHO01000052
280557
Bacteroidota
CAT
Met
>WENV182840821
OKHO01000045
398872
Bacteroidota
GGT
Thr
>WENV182840810
OKHO01000037
175936
Bacteroidota
CAT
Met
>WENV182840783
OKHO01000011
57807
Bacteroidota
TGA
Ser
>WENV182840784
OKHO01000011
57807
Bacteroidota
TGA
Ser
>WENV182840807
OKHO01000033
398860
Bacteroidota
CTC
Glu
>WENV182840836
OKHO01000076
480404
Bacteroidota
TTG
Gln
>WENV182840835
OKHO01000075
99847
Bacteroidota
GTA
Tyr
>WENV182840798
OKHO01000027
20766
Bacteroidota
GGA
Ser
>WENV182840782
OKHO01000009
175844
Bacteroidota
GGC
Ala
>WENV182840823
OKHO01000046
280532
Bacteroidota
>WENV182840791
OKHO01000019
480318
Bacteroidota
CTG
Gln
>WENV182840816
OKHO01000041
176192
Bacteroidota
TCT
Arg
>WENV182840787
OKHO01000015
117804
Bacteroidota
TAG
Leu
>WENV182840785
OKHO01000011
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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